Gene Sterm_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_2354 
Symbol 
ID8597818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp2500433 
End bp2501269 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content33% 
IMG OID 
ProductUDP-3-0-acyl N-acetylglucosamine deacetylase 
Protein accessionYP_003309138 
Protein GI269120961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000823328 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA AGACTATAAA AGATGAAATT ACTTATAATG GAATAGGGCT TCATAAGGGT 
GAAAAAATAG AAATAAAATT AAGACCGGTA ACTGATTACA GCGGAATTAC ATTCAAAAGG
GTCGATCTTC CGGGAGATAA CGAAATAAAA GTTTCTCCTG ATAATCTTTT TGAGCTGGAA
AGAGGGACAA ATATAAGAAA TTCCAGTGGT GCGATGGTTT ATACCATAGA GCATATAATG
TCAGTATTTC ACATAACAGG GATAACAGAT CTGTTAGTGG AAATAAACGG TAATGAACTG
CCTATTATGG ACGGAAGCTC TGTTATATTT ATAGAAAAAA TAAATGAAAC AGGACTTATA
GAGCTGGAAA GAGACATAGA ACCTGTTGTA ATAACAGAGC CTGTTTATTT TTCAGAGGAG
AAAGACGGGA AATACATAAT TGCCCTGCCG TATGACGGAT TTAAAATATC GTATACGATA
GATTTTGGTC ATACTTTTCT GAAAGCACAA TATTATGAAA TAGATCTGAA TCAGGAAAAT
TATACGAAAG AGATAGCACC TGCAAGAACA TTTTGCTTTG ATTATGAAAT AGAATATATG
CAGAGTCATA ATCTTGCTTT GGGCGGAAGT CTCGAGAATG CAATTGTTAT AAAAAAAGAC
GGTGTAATTA ATCCCGAAGG TCTCAGATAT GAAACCGAGT TCGTAAGACA TAAAATTCTG
GATCTGATAG GAGATATATA TATATTGAAC AGACCTGTAA AAGGACACCT GATAGCTGTG
AAAGCAGGAC ATTTTATAAA TTCAAAATTA TCAGAAAAAC TGAAAAGTTT AATATAA
 
Protein sequence
MKRKTIKDEI TYNGIGLHKG EKIEIKLRPV TDYSGITFKR VDLPGDNEIK VSPDNLFELE 
RGTNIRNSSG AMVYTIEHIM SVFHITGITD LLVEINGNEL PIMDGSSVIF IEKINETGLI
ELERDIEPVV ITEPVYFSEE KDGKYIIALP YDGFKISYTI DFGHTFLKAQ YYEIDLNQEN
YTKEIAPART FCFDYEIEYM QSHNLALGGS LENAIVIKKD GVINPEGLRY ETEFVRHKIL
DLIGDIYILN RPVKGHLIAV KAGHFINSKL SEKLKSLI