Gene Sterm_0582 details

Gene Information

• Locus tag: Sterm_0582
• ID: 8596066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 635135
• End bp: 637129
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 36%
• Product: TonB-dependent receptor plug
• Protein accession: YP_003307386
• Protein GI: 269119209

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000848459
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAGA AAATTGCAAT TTTATGTTTA TTGGCTATTG CTCTTCTTGC CAATGCAAAT 
GAGGAAGTCA CTGTTACAGG TGAAATCAGA ATGGACGAGA ATATAACAAC AACTACAGGT 
TTTGAAAGTA CAGTAAAGGA GCAGGTAAAG AATGTTACTG TAATTTCAAG AGATGATATA 
GAAAAGAAAG GATATAAGAA TCTTCAGGAA GTACTTAGAG ATGCACCCGG TATTACATTT 
GTAGATGCCG GAGGCGGAGC AAGTATTGAT ATGAGAGGTC AGGGAGATAA AGCTGTTTCT 
AAAGTAAAAG TACTTGTAGA CGGAGTAATG ATGAATCTTC TTGATACTTC ACACGGAGTT 
ACACCTATTA ATACAATAGG AGTATCAAAT ATTGAAAGAA TAGAAATAAT TCCCGGAGGC 
GGTGCCGTGC TGTACGGAAA CGGAACTGTA GGGGGAGTGG TTAACATTAT AACTAAAAAA 
CCTACTGAAA CAGGCGGAAG AATAGGTGCG GAATATGGTT CGCACTATGA TAAAAATGCT 
AATGCCTATC TGGGATTTAA GATAAATGAG CAGCTGTACC TAAACTTTGA TTACAGCGGA 
AGAGACGCAC ATACATACAG AGATAAGGAA GAATTCAGAA ATGACTACTG GGCGGCAGGA 
ATAAGATATG ATATAAGTGA CAGACAATCA TTGGCGTTTA AAGGAAGCAG ATTCACAGAG 
GACGGGACTT CGGTAGGAGC TCTTACACAG GCTCAGATGG ATCAGAACAG AGAACAGGCA 
GGTTCGTCAC TTACAAATTA TGATGAAACA AGAACTGAAT TTGTACTGGA TTATGGAATA 
AATGTACTGG ATAATCTTAG ATTTGACATT ACAGGATATT GGCAGGAAGA TGAGACTAAG 
ACAAAACAGG ATGCTAAAAT GGGGTCAATC TCTTATACTT CAAACGGATT ATTTGATGAT 
GAAAAATTTG GAATAAACCT GAAGGGTAAA TATAATTATT CAAAAGGGGA ATTAATATTC 
GGTTACAACT ATCTGGACAA TGATATGAAA AGACAGAGTC ATTCAATACT TGCATCAGGT 
GCAACAATGA GTAAAACAAC AGTAGACCTT GGAAAAGTGA CAAACAGTCT TTACATCTTA 
GAAAAGCATA ATATTTTGGA TAACTTGCAA ATCATCGGCG GATTCAGAGA AGAGTGGGCT 
AAATATACTA TAGACAGAAC AGACGGTACT TATGCGCTTA ACAAAGATGA TAATGACAGT 
AACAGTGCAT GGGAACTGGC TTTAAATTAT CTTTACAGAG ATACGGGGAA TGTATATATG 
AGATATGAAC ACGGATTCTT ATCACCTACA CCAACACAGC TGACAAATAA AGATCCGTTA 
ACAGGATATT ACTTAAATGA CCTGAAATCG GAAACTTACG ATACATATGA AATAGGAATG 
AAAGATGTAG TTTTAGGATC TTATGTTTCA TTAACTGGAT TCTATACTAA GACAAAGGAT 
GAAATTTCAC AGGTGTTTAC TACCGGTCAT GGTATGGGAT GGGAATTCTA TAACCTTGAT 
GAAACTGAAA GATACGGAAT CGAAGCATTT GCAGAGCAGT ATTTCGGACC TGTAACAATA 
AACGAATCGA TAGCTTATAT AGATGCCGAA ATTACTTCCG GAAGTAAAAA AGGACAGAAT 
ATACCTTATG TATCTGATAT CAAAGCAACT ATAGGCGTAA AATACGAAAT TATCAAAAAC 
CTGAATGCAG GATTAAACTT TAACTATTAC GGAGATGCCG AAGATGCTGC AGGAAAGAAA 
GTAGATGCTT ACAGTACTAC AGACTTCGTA GTAAGCTATG ACTTTGAAAA CGGAATTGGA 
ATTATAGCCG GAGTTAATAA TTTATTCAAT GAAAAATATA ATACATACCA AAGTACAAGC 
ACAAGTACCG GGGTAACTGA ATATAAACCC GCAGACGAAA TTAATTATTA TGTAGGAGTG 
AGATATGCAT TCTAG 

 

Protein sequence

MFKKIAILCL LAIALLANAN EEVTVTGEIR MDENITTTTG FESTVKEQVK NVTVISRDDI 
EKKGYKNLQE VLRDAPGITF VDAGGGASID MRGQGDKAVS KVKVLVDGVM MNLLDTSHGV 
TPINTIGVSN IERIEIIPGG GAVLYGNGTV GGVVNIITKK PTETGGRIGA EYGSHYDKNA 
NAYLGFKINE QLYLNFDYSG RDAHTYRDKE EFRNDYWAAG IRYDISDRQS LAFKGSRFTE 
DGTSVGALTQ AQMDQNREQA GSSLTNYDET RTEFVLDYGI NVLDNLRFDI TGYWQEDETK 
TKQDAKMGSI SYTSNGLFDD EKFGINLKGK YNYSKGELIF GYNYLDNDMK RQSHSILASG 
ATMSKTTVDL GKVTNSLYIL EKHNILDNLQ IIGGFREEWA KYTIDRTDGT YALNKDDNDS 
NSAWELALNY LYRDTGNVYM RYEHGFLSPT PTQLTNKDPL TGYYLNDLKS ETYDTYEIGM 
KDVVLGSYVS LTGFYTKTKD EISQVFTTGH GMGWEFYNLD ETERYGIEAF AEQYFGPVTI 
NESIAYIDAE ITSGSKKGQN IPYVSDIKAT IGVKYEIIKN LNAGLNFNYY GDAEDAAGKK 
VDAYSTTDFV VSYDFENGIG IIAGVNNLFN EKYNTYQSTS TSTGVTEYKP ADEINYYVGV 
RYAF