Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_0282 |
Symbol | |
ID | 8599593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 305086 |
End bp | 306861 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | Polypeptide-transport-associated domain protein ShlB-type |
Protein accession | YP_003307097 |
Protein GI | 269118920 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00122083 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA AAATAATAGC AGTTTTTTTA TTGGGAAGCA TTGTATTTTC AGCAGGAGTG GGAGATATAA TAGAAAGAAA CAATGCTGCA ATAGAAAATG AAAGAAGACA GCAGGAGCTG GAGAGAAGGC AAAAGGAACT GGAAAGAGAG AACTTCGGGA AAGAACCTCA GATAATAGAC GGTACTGGTG AGGTCGATAC AAGTGTAAGA TTCTTTATCA GAAAGATAGA AGTACAGGAC GAATATAATC TTCTGAGCAA AGCTGAGATA AAAGCCGTAA TAAAGAAATA TCTGAACAGA AAGCTAAGCT CCAAGGATAT AAATAAGCTT ATGACAGAAC TTAATAATAA ATATATAGAA AAGGGATATA TAACAACAAG AGTAAGGCTT GACGAAACAC AAAACCTAAG TGAGGGAACG ATAAGACTGA TAACTCTGCC CGGAACAGTG GAAGGAGCAA GCCTGAATGA AAATACCTTT TCTGACAGGA TGAAGGTATT TATGTCAGTT CCAAAGAATA AGAAGAGAAT ATTAAGATTA CAGGATACAG AACAGGCAAC AGATCAGTTT AACAGGGTAT CAAGTAATAA TGTAGAGATA AAAATAGCAC CGGGACAGGA AGCAGGAGGT TCTATACTAC AGATAGAAAA CCAGCAGACC AGGACATTTA ATGCAAATAT CTCATATAAT AACTATGGAG ATGAATCAAC AGGAAGAGAC AGAGGAAAGA TAGATATTAC GAAGGATAAT CTTTTTGGAA TAAATGACAG TTTTTATGCT TCATATCAGA GAGGGAGGAA TAAAAGACCC TTGAGAAATG ATTATACAGG CTCATCCTCA ATACCGCCGG GAACGATAAT CAAGGATAAG GATGATCTTC TTCCTGCAGA TACAGAAGCG GAACCGGAAA AGTTCAATGA AGACTGGTCA TTGAATTATT CATTTCCATT CAGATACTGG ACATTCAGTA CAGGCTACAG TCATTCGTAC TATATAAGCA GCAGTGAAGG ATATAACGGA CTGTATGATA CAAGCGGGAG ATCAACCCAG TTTAATCTGA ATGCAGACAG AGTGGTATAC AGAAATAAAA TGAGTAAGAT AAGTATAAAC GGAGGACTAA AGCTAAAGAC AAATCAGAAT TACTTTGAAG ATGTCCAGCT TGTGGACAGG AGACTGACAA TAGGAAGTCT TGGAATAAAT TACAGCAGAG GTTTCTTTGG AGGAATACTG GGATTTGATG TTTCATATGA CAGAGGACTT CCATGGTTCA GATCAGCGGA TGATCATGAG AAGGAGATAT ATGATCCAAA GGGAAGATTT GACAAGTATG GACTTAATAT AAACTGGTAT AAGCCGATGA CAATAGGAAA GCAAAGATTT ACCTATAGAC TGGTAGGAGT GGGACAGTAT ACACAGGATG TACTTTATGG AAGTGAAAAG ATAAGTATGG GAGATGAGTA CACAATAAGA GGATATAAAG GAGATTCCAT ATCGGGAGAT AAAGGATATT ATGTAAAAAA TGAGCTGTCA TATAACTTAA ATATATCAAA AATAGGAAGT ATATCGCCGT ATATAGGTTA TGACTTTGGA GAGAGCTGGA ATAATGAGGT ACATGATATA TACAGATATG GATACATGAG AGGATTTGCA GTAGGAGTAA AGTATTACGG GGAAATATTT AATTTTGATA TAGCATATAC GAAGCCTGAT AAGGCATCGG GTTATGTAAG TAAACCTGAG GATGAGGTAT ATGTGACATT TGGAATAAAA TTTTAA
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Protein sequence | MKKKIIAVFL LGSIVFSAGV GDIIERNNAA IENERRQQEL ERRQKELERE NFGKEPQIID GTGEVDTSVR FFIRKIEVQD EYNLLSKAEI KAVIKKYLNR KLSSKDINKL MTELNNKYIE KGYITTRVRL DETQNLSEGT IRLITLPGTV EGASLNENTF SDRMKVFMSV PKNKKRILRL QDTEQATDQF NRVSSNNVEI KIAPGQEAGG SILQIENQQT RTFNANISYN NYGDESTGRD RGKIDITKDN LFGINDSFYA SYQRGRNKRP LRNDYTGSSS IPPGTIIKDK DDLLPADTEA EPEKFNEDWS LNYSFPFRYW TFSTGYSHSY YISSSEGYNG LYDTSGRSTQ FNLNADRVVY RNKMSKISIN GGLKLKTNQN YFEDVQLVDR RLTIGSLGIN YSRGFFGGIL GFDVSYDRGL PWFRSADDHE KEIYDPKGRF DKYGLNINWY KPMTIGKQRF TYRLVGVGQY TQDVLYGSEK ISMGDEYTIR GYKGDSISGD KGYYVKNELS YNLNISKIGS ISPYIGYDFG ESWNNEVHDI YRYGYMRGFA VGVKYYGEIF NFDIAYTKPD KASGYVSKPE DEVYVTFGIK F
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