45 homologs were found in PanDaTox collection
for query gene Shew_1331 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_1331  spore coat polysaccharide biosynthesis protein glycosyltransferase-like  100 
 
 
356 aa  738    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3115  spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein  53.71 
 
 
233 aa  257  2e-67  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3075  spore coat polysaccharide biosynthesis protein glycosyltransferase-like  28.01 
 
 
373 aa  104  2e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1777  spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein  26.84 
 
 
353 aa  100  4e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3117  hypothetical protein  51.92 
 
 
111 aa  100  6e-20  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2222  glycosyltransferase 28-like protein  25.07 
 
 
354 aa  92.8  8e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1967  flagellin modification protein FlmD  26.51 
 
 
353 aa  91.7  2e-17  Maricaulis maris MCS10  Bacteria  normal  0.979737  normal 
 
 
-
 
NC_008346  Swol_0212  glycosyltransferase  25.94 
 
 
331 aa  89  1e-16  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3708  GCN5-related N-acetyltransferase  27.92 
 
 
491 aa  84  0.000000000000004  Pseudomonas putida W619  Bacteria  normal  0.446745  normal 
 
 
-
 
NC_007498  Pcar_1136  polysaccharide biosynthesis protein, glycosyltransferase  25 
 
 
362 aa  81.6  0.00000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2095  putative flagellin modification protein FlmD  25.46 
 
 
367 aa  80.5  0.00000000000004  Colwellia psychrerythraea 34H  Bacteria  normal  0.855243  n/a   
 
 
-
 
NC_009767  Rcas_0775  GCN5-related N-acetyltransferase  23.81 
 
 
502 aa  79.7  0.00000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.736267 
 
 
-
 
NC_013730  Slin_4265  pseudaminic acid biosynthesis-associated protein PseG  23.8 
 
 
344 aa  79.3  0.00000000000009  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.514785 
 
 
-
 
NC_009654  Mmwyl1_3563  spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein  28.79 
 
 
337 aa  76.6  0.0000000000005  Marinomonas sp. MWYL1  Bacteria  normal  0.617953  normal  0.902777 
 
 
-
 
NC_013421  Pecwa_3029  pseudaminic acid biosynthesis-associated protein PseG  23.26 
 
 
367 aa  75.1  0.000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2427  Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase-like protein  24.01 
 
 
349 aa  74.3  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  0.506517  normal 
 
 
-
 
NC_011772  BCG9842_B1722  pseudaminic acid biosynthesis-associated protein PseG  26.17 
 
 
366 aa  69.3  0.0000000001  Bacillus cereus G9842  Bacteria  normal  0.725553  hitchhiker  0.000000995327 
 
 
-
 
NC_012856  Rpic12D_0585  Glycosyltransferase 28 domain protein  26.38 
 
 
357 aa  68.9  0.0000000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009707  JJD26997_0402  putative flagellar protein  23.88 
 
 
274 aa  66.2  0.0000000008  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.537873  n/a   
 
 
-
 
NC_012039  Cla_1321  nucleotidase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc  23.02 
 
 
274 aa  65.9  0.000000001  Campylobacter lari RM2100  Bacteria  hitchhiker  0.0000000165728  n/a   
 
 
-
 
NC_008340  Mlg_2325  putative polysaccharide biosynthesis protein  24.37 
 
 
399 aa  65.5  0.000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.412888 
 
 
-
 
NC_008787  CJJ81176_1329  flagellar protein, putative  23.19 
 
 
274 aa  63.2  0.000000006  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1507  flagellar protein, putative  23.19 
 
 
274 aa  63.2  0.000000006  Campylobacter jejuni RM1221  Bacteria  normal  0.104549  n/a   
 
 
-
 
NC_009438  Sputcn32_2626  FlaR protein (FlaR)  23.73 
 
 
371 aa  63.2  0.000000007  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0657  polysaccharide biosynthesis protein  26.13 
 
 
349 aa  61.2  0.00000003  Psychrobacter arcticus 273-4  Bacteria  normal  0.140492  normal 
 
 
-
 
NC_007492  Pfl01_1522  GCN5-related N-acetyltransferase  23.24 
 
 
500 aa  60.5  0.00000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0454  acylneuraminate cytidylyltransferase  21.39 
 
 
593 aa  60.8  0.00000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4299  flagellin modification protein FlmD  23.68 
 
 
346 aa  60.1  0.00000005  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3551  flagellin modification protein FlmD  27.18 
 
 
348 aa  60.1  0.00000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.288213  normal  0.478798 
 
 
-
 
NC_008686  Pden_0088  flagellin modification protein FlmD  27.18 
 
 
348 aa  60.1  0.00000006  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3209  pseudaminic acid biosynthesis-associated protein PseG  23.83 
 
 
349 aa  59.3  0.00000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_2760  polysaccharide biosynthesis protein; glycosyltransferase  24.41 
 
 
344 aa  59.3  0.0000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.729819  normal 
 
 
-
 
NC_008577  Shewana3_1308  GCN5-related N-acetyltransferase  24.61 
 
 
525 aa  57.8  0.0000003  Shewanella sp. ANA-3  Bacteria  normal  normal  0.881798 
 
 
-
 
NC_011883  Ddes_2211  cytidine 5'monophosphate N-acetylneuraminic acid synthetase  25.1 
 
 
543 aa  56.2  0.0000007  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0611  LmbE family protein  29.15 
 
 
569 aa  56.2  0.0000009  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3944  Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase  24.02 
 
 
342 aa  55.8  0.000001  Pedobacter heparinus DSM 2366  Bacteria  normal  0.13692  normal  0.0702368 
 
 
-
 
NC_007298  Daro_1246  surface polysaccharide biosynthesis protein, transferase  23.13 
 
 
359 aa  54.7  0.000002  Dechloromonas aromatica RCB  Bacteria  normal  0.714315  normal 
 
 
-
 
NC_007954  Sden_1283  putative polysaccharide biosynthesis protein  24.46 
 
 
343 aa  53.9  0.000004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0563  putative flagellar protein  22.61 
 
 
291 aa  53.1  0.000007  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1913  acylneuraminate cytidylyltransferase  24.44 
 
 
548 aa  51.6  0.00002  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000953718 
 
 
-
 
NC_013512  Sdel_2211  pseudaminic acid biosynthesis-associated protein PseG  23.27 
 
 
285 aa  51.2  0.00003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0421  spore coat polysaccharide biosynthesis protein FlmC  25.62 
 
 
611 aa  50.8  0.00004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1970  spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein  24.57 
 
 
312 aa  46.2  0.001  Maricaulis maris MCS10  Bacteria  normal  0.750902  normal 
 
 
-
 
NC_008751  Dvul_2633  cytidine 5'monophosphate N-acetylneuraminic acid synthetase  24.02 
 
 
544 aa  46.2  0.001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.116941  normal 
 
 
-
 
NC_007796  Mhun_3096  GCN5-related N-acetyltransferase  25.5 
 
 
497 aa  43.9  0.005  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.207791 
 
 
-
 
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