| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1777 |
|---|
| Symbol | |
|---|
| ID | 6027266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1867971 |
|---|
| End bp | 1869032 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641594594 |
|---|
| Product | spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein |
|---|
| Protein accession | YP_001717905 |
|---|
| Protein GI | 169831923 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR03590] pseudaminic acid biosynthesis-associated protein PseG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTACTTG CCGGATCGAG GTACAACCGA ACACTAATCA TTCGTGCCGA TGCAAATACG
CGGATCGGTA CAGGCCATCT AATGCGCTGC CTGGCCCTGG CTCAAGCCTG GAAAGATCGT
GGCGGGCGTG TGGTATTAAT TACCGCCTGC GAAAGTGAGG GTCTGCTTCA GCGTCTGCAC
GATGAGGGGC TTATAGTTAT CAAGTTGACA CAACCATATC CCAATCCTGT TGATTGGAAG
GTCACCTCGG ATGTGTTGGC GCAACATCCT GGAGCATGGG TGGTGTTGGA TGGCTACCAC
TTTGATTCAG AATATCAGCG AAGAGTCAAA ACATCTGGAC ATAAACTCTT GATTATTGAC
GATATGGCTC ATCTTGAGCA CTACTACGCC GATGTAGTTT TGAATCAAAA CTTGCACGCA
GAAGAATTGA ATTATTCTTG CGAATCATAT ACCCGCCTCC TCCTGGGAAC CAGGTACGTG
CTCTTGCGCC GAGAGTTTTT GAAGTGGCAG GGCTGGCAAC GCAACATCCC GGAGATGGCA
CGTAAGGTGC TGGTTACGCT GGGCGGAAGT GATCCTGACA ATGTGACCCT TAAGGTAATC
CAAGCACTGC AACTCGTAGA GGTAGACGGG ATGGAAGCGG TGGTTGTAGT TGGCGGAACT
AATTCGCATT ATAAGGAATT GCAATCCGCT GTGGAGCAAC TAAGATTTTA TATCCGGCTC
GAAAGCAATG TGCCAAACAT GCCCGAACTG ATGGCTTGGT CTGATGTGGC GATTTCTGCG
GGGGGAATCA CTGTATGGGA GTTGGCTTTT ATGGGGGTTC CAATTGTTGG GCTGAGTCAA
GCAGAGCAGG AGAAAGTGCT TCTCCAAGGA TCTACCAACT CTGGCATTTC GGTAAATCTG
GGAGGGCATC GGTATATCGA GCCGCGTCGG ATTGCTGAAG TGCTAACTGG GTTAGTTAGC
AACAGAGATC AGCGTGCAGC TATGAGCAGG GCGGGGCGTG CCTTGGTGGA CGGGTTTGGC
TCTGCACGGG TAATAACTTT AGAGAAGGAG AATCAGGCAT GA
|
|---|
| Protein sequence | MLLAGSRYNR TLIIRADANT RIGTGHLMRC LALAQAWKDR GGRVVLITAC ESEGLLQRLH
DEGLIVIKLT QPYPNPVDWK VTSDVLAQHP GAWVVLDGYH FDSEYQRRVK TSGHKLLIID
DMAHLEHYYA DVVLNQNLHA EELNYSCESY TRLLLGTRYV LLRREFLKWQ GWQRNIPEMA
RKVLVTLGGS DPDNVTLKVI QALQLVEVDG MEAVVVVGGT NSHYKELQSA VEQLRFYIRL
ESNVPNMPEL MAWSDVAISA GGITVWELAF MGVPIVGLSQ AEQEKVLLQG STNSGISVNL
GGHRYIEPRR IAEVLTGLVS NRDQRAAMSR AGRALVDGFG SARVITLEKE NQA
|
|---|
| |