| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0585 |
|---|
| Symbol | |
|---|
| ID | 8018211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 621140 |
|---|
| End bp | 622213 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644829364 |
|---|
| Product | Glycosyltransferase 28 domain protein |
|---|
| Protein accession | YP_002980562 |
|---|
| Protein GI | 241662202 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR03590] pseudaminic acid biosynthesis-associated protein PseG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTG CGATCCGAGC TGACGCATCG GTTCAGATCG GCTCAGGCCA TGCGGTGCGT
TGCCTAACGC TGGCTGACGA GCTGCGCGCG CGCGGCGCGG AAGTCTTGTT TATCAGCCGA
GCGCATCAAG GTGGAGCCCG TGCTTTGCTG GAGCAACGCG GCTACACCTG CGTTGTGTTG
CCTGCGCCAA CAATCTCCGA TGCGCTCTTG GGCGACCTCG CTCACAGCGC ATGGCTGGGC
GTGTCCATGG AGGAAGACCT TGCGCAGACT GCTGCAGCAG TGCAGGGATG GGCTGCCGAC
TGGCTGGTGG TCGACCACTA CGCGATCGAT TGGCGCTGGG AGCGGGCAAT GCGGTCCTAC
GTGCCGCGTA TCATGGCTAT CGACGATTTA GCTGACCGCC GTCATGATTG CGATCTTCTC
TTAGATCAAA ACTTCTATTG CGACATGGAG ACGCGGTACG AAGGACTGGT GCCGGCGCAC
TGCAGGTGCT TGCTGGGCCC CAGCTACGCT TTGCTGCGTG CCGAGTTTGC TGCGGTCAGT
CGTCCTCACC GAGAGCAGGG AGCAGTAAAG CGCATCCTTT TGTTCATGGG AGGGGTGGAC
CGCGACAATG CAACTGCGAC GGCGCTGCGT GGGCTCAATG AAGCGGCCAG TGCAGGCATT
GCGATCGATG TTGTGCTTGG GGCCGCTGCG CCTCATCTCG AGCAGGTGCG CGCCTTGTGT
GACGTGACTC CGAATGTGCA TCTGCATGTA CAGATCGACA ACATGGCCGA ATTGATGGCT
AGCGCCGATT TGGCGATCGG GGCATGTGGT TCCGCCACGT GGGAGCGCTG TTTCCTGGGC
CTGCCGACGA TCACCATTGT GTTGGCTGAC AATCAACGGA AGTCTGCACA CGATTTGGCT
CAGGCTGGCT ATATCGTTAA CCTGGGCGAC GTCGAGACGG TCACTCCGCA TGCGGTGGCG
AGGGCGGTCC ACGCAATGAT CGAAGACCCC GCAGGGCGTG CGGCCATGTC TCACCGCGTG
GAGGCTCTGG CGAGCCGCCG TGGTCCGATT GCAGCCGACC TCATCTGCGA ATAG
|
|---|
| Protein sequence | MKVAIRADAS VQIGSGHAVR CLTLADELRA RGAEVLFISR AHQGGARALL EQRGYTCVVL
PAPTISDALL GDLAHSAWLG VSMEEDLAQT AAAVQGWAAD WLVVDHYAID WRWERAMRSY
VPRIMAIDDL ADRRHDCDLL LDQNFYCDME TRYEGLVPAH CRCLLGPSYA LLRAEFAAVS
RPHREQGAVK RILLFMGGVD RDNATATALR GLNEAASAGI AIDVVLGAAA PHLEQVRALC
DVTPNVHLHV QIDNMAELMA SADLAIGACG SATWERCFLG LPTITIVLAD NQRKSAHDLA
QAGYIVNLGD VETVTPHAVA RAVHAMIEDP AGRAAMSHRV EALASRRGPI AADLICE
|
|---|
| |