| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1308 |
|---|
| Symbol | |
|---|
| ID | 4478821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1522536 |
|---|
| End bp | 1524113 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639725862 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_868948 |
|---|
| Protein GI | 117919756 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR03590] pseudaminic acid biosynthesis-associated protein PseG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.881798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGATA ATTTACAGGC AGCGTTATCA GACAGCCAGA CCGTTGTTTT TCGCACAGAC
TCAAGCCGGA GCATAGGTTA TGGACATGTT ATGCGCTGCC TTACGCTGGC AATGGCCTTA
AAACAGCAGG GTTGCCAATG CTATTTCATA TGCCGTGATC TACTCAATAA TCACAGCGCT
TTGGTCGAAC AACATGGCTT TGTGTTGGTG CTATTACCCC GGGATACATA TCTGAGTCCA
GAAAATGATA CCTCAGAGCC ACGTCACTGC AGCTTGCTGG AGACAAGTTG GCAGCATGAC
ATCAGCCAAT GTGTTTCACA TTTTAATGTA ATCAAACCAG ATATTATTGT TGTCGATCAT
TATGCTCTTG ATGAAAAATG GGAAACACAA GCCAAGGCAT ATTGCAAAAA GCTGATGGTT
ATCGATGACC TGGCAGACAG GATGCATAGA TGCGATATAT TACTCGACTA CAACTTGAGC
GTTAAATCCA ACGCATATAA AACTTGGGTT CCTCAAAAGT GCCAATTACT ACTTGGTGGA
AAATATGTCT TGCTGCGAGA CGAATTCAAG CAGTGGCAAT ATTTGAGTAT CCAAAGGCGC
ATTTCCAAAC GGCTCGAGAC AATTCTCGTT ACGTTCGGCG GGATAGACAG CGACAACAAC
AGCGAAAAGG TCTTACAGGT CATTAAAGAC ACACCATTGT TGGCCCTGAA ACGAATAGAC
GTTGTAGTCA GCGCCAATGC ACCCCATTTG TCATCCTTGC AATCTGCCGC ACAAGCCATG
CAAATCGAAA CCCACATCCA TACCAATGTA AATAACATGG CAGAGCTTAT GGCAGTCGCT
GATCTCGCCA TTGGCTCGGG AGGGGGCTGC ACTTACGAAA GATTGTTTAT GAAATTGCCC
TCGTTATTGA TGCCTATTGC CGACAATCAG GTTACCCCCT TACTTTCCAT GAGCCAATTA
GGCCTCTTTG AGCTGTTTTT AAATTTTAAT GAACTCTCAA TAAAACTTGG ACGCTATTGT
TCACATCCCC TGCCTTTGGT TGCGGCGCCA GTGCTGTTTG GTGCACCTCT GGTGTGTCAA
AACCTATTGG CCAAAGAGGT TACCTTGGCC GATGTGAAAC CGCTGGATAT CAGACGAACC
TTCCATTGGT TGCAAGATGT AACACTAAGG GGGCAGTTTG TACAAACCAA AGCCCCTGTC
AAAGCATCGC ACTTTATCTA TTGGCGAGCA TTGCTCAAAG ATCAAACCCA ATATACCTTC
AGCATCCTTC AACAAGGACG GCACGTGGGT AACCTAGGTA TTAAACACCT AAACGTGCAA
CGGAGCGAAG CCGAGCTGTG GATCTACATT GGCGTACAAA CCGAACAGAA TAAAGGTTTG
GGAACCATAG CCTTGACATT GCTGGAAAAC ATCATTAAAC ACACTCTGCT CATTAATAAC
ATTGTGATCC ATGTAGCTAA AGACAATAGC CCAGCACTGT CGTTTTACAA TAAACTGGGA
TATGTGATCT GCGATGACAA ACTGATCGCT GCGGAATTTT CCGAAAAAAA TGTACTACAA
ATGAGAAAAG TATTATGA
|
|---|
| Protein sequence | MVDNLQAALS DSQTVVFRTD SSRSIGYGHV MRCLTLAMAL KQQGCQCYFI CRDLLNNHSA
LVEQHGFVLV LLPRDTYLSP ENDTSEPRHC SLLETSWQHD ISQCVSHFNV IKPDIIVVDH
YALDEKWETQ AKAYCKKLMV IDDLADRMHR CDILLDYNLS VKSNAYKTWV PQKCQLLLGG
KYVLLRDEFK QWQYLSIQRR ISKRLETILV TFGGIDSDNN SEKVLQVIKD TPLLALKRID
VVVSANAPHL SSLQSAAQAM QIETHIHTNV NNMAELMAVA DLAIGSGGGC TYERLFMKLP
SLLMPIADNQ VTPLLSMSQL GLFELFLNFN ELSIKLGRYC SHPLPLVAAP VLFGAPLVCQ
NLLAKEVTLA DVKPLDIRRT FHWLQDVTLR GQFVQTKAPV KASHFIYWRA LLKDQTQYTF
SILQQGRHVG NLGIKHLNVQ RSEAELWIYI GVQTEQNKGL GTIALTLLEN IIKHTLLINN
IVIHVAKDNS PALSFYNKLG YVICDDKLIA AEFSEKNVLQ MRKVL
|
|---|
| |