| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3944 |
|---|
| Symbol | |
|---|
| ID | 8255078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4744322 |
|---|
| End bp | 4745350 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644937608 |
|---|
| Product | Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase |
|---|
| Protein accession | YP_003094197 |
|---|
| Protein GI | 255533825 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
|---|
| TIGRFAM ID | [TIGR03590] pseudaminic acid biosynthesis-associated protein PseG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.13692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0702368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAC CCAGAATTCT CTTTAGGGCT GATGGAAATA ATAAAATTGG TTTAGGGCAT
ATTATGAGAT GCATTGCATT ATCGGAGATG CTTAGTCCAA ACTTTAATTG TGTTTTCTTA
ATTTCAAAAC CGAGTTTAGA ACTACAATCT ATTATACGAA CTTTTGGAGA TCTGATTGAA
TTAAAATCCA ATACTAAAAT AGATGAGTTA TTTGAAATAA CCCCATTGTT ACTGTCAACA
GATATTGTTG TAACAGACGG ATATGATTTT AACAATGTTT ATCTTAAATA TATTAAGTGC
AGAGTTCATA AGCTGGTTGT GATCGATGAT TTAGCAAAAG GTGAATTTAT TGCAGATTTA
GTAATTAATC ATGGTGGAGA ATACATAAAG GATAAGTACA AAACGGAATC ATATACGAGG
CTTCTAATTG GATTTGATTA TCTTATTGTT AGAAAAGCTT TTATTCAAGC TTTGACCAAA
AATAGAGTGA TAGATGAGAT AGAAACAGTT TTTATTTGTA TGGGGGGCGC CGATCCTTTT
TCTGTCACGA CAAAAGTTAT AAAGGCATGT ATAAAATCTG GATTTGTTAA AAATATTATA
GTTGTTATTG GAAATGCTTA TGTTAATACA AATGACTTAA TAAATTTGAT CGAGAATGAA
AATGAAGGCA TTAATATAAA GTTAGAAAGA AATTTAAGTG CTGAACTTAT GGTTGATATG
ATTAGTGCTT GCCAACTTTC TATTTGTCCT GCAAGTTCCA TTTCTCTAGA GGTTTGTTGC
GTTAAATCAG GATTATTAAC TGGTACTGTA ATTGATAATC AGTTTGCAAT ACACGAACAA
TTAATTCGTA AAGGCTGTGC AATGAGTATT GGGGATTTTA ATAAAGCCAC GATTGAAGAT
ATTATTACCG CCCTTAATGA GGTAAATTCT GTTGAAAGGA TAAATGAGCT AATTAGATGT
CAAAAATTGG CTACAATGAG GGTACACAAT GAAGAATTAT TAAAGGAATT CATGAAATTA
AGTTTATGA
|
|---|
| Protein sequence | MHKPRILFRA DGNNKIGLGH IMRCIALSEM LSPNFNCVFL ISKPSLELQS IIRTFGDLIE
LKSNTKIDEL FEITPLLLST DIVVTDGYDF NNVYLKYIKC RVHKLVVIDD LAKGEFIADL
VINHGGEYIK DKYKTESYTR LLIGFDYLIV RKAFIQALTK NRVIDEIETV FICMGGADPF
SVTTKVIKAC IKSGFVKNII VVIGNAYVNT NDLINLIENE NEGINIKLER NLSAELMVDM
ISACQLSICP ASSISLEVCC VKSGLLTGTV IDNQFAIHEQ LIRKGCAMSI GDFNKATIED
IITALNEVNS VERINELIRC QKLATMRVHN EELLKEFMKL SL
|
|---|
| |