| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1331 |
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| Symbol | |
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| ID | 4922573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 1542317 |
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| End bp | 1543387 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640162871 |
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| Product | spore coat polysaccharide biosynthesis protein glycosyltransferase-like |
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| Protein accession | YP_001093459 |
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| Protein GI | 127512262 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
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| TIGRFAM ID | [TIGR03590] pseudaminic acid biosynthesis-associated protein PseG |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGATT CCTTGCCGGC TAAGCCTAAA GCCGCTTTTT ACGGTAACAA TTCCCACCGA
ATTGGCGCCG GACACATTAT GCGCCTCTAC GCCCTCGCTG AAGCTGCCGC AAATCAATTT
GATATTTGGT TTGTCTATAA GACCTGCAGC GATGCGCTAC TGAGTAAACT TAAACGGGCT
AATTTTAATC TGCTCCAAAT ATCATCTAGC TTGACCGGTA GCGAATTAAA ACAGCATAAA
TTCGACACAA TAATAGTCGA TGACTACGAG TTAACTGGCA ACGAATGGCA TCAACTTGTA
AGTACTGGAA GCTACCTCGT TAAACTGGAT GATGCCCTTG ATGATGACCC AATACTAGCC
GATTTAATTA TCAACCCTGC ACCTAACTGT ACCCAAACGG ATTATCAAAG CAGGGCACCG
CATGCTAACT ACTGCCTTGG GCCACATTTT ACCTATTTAA GACGAGAGTT TACGACTTGC
CATTTTACAC CGTTAATGGC GCGCCCTAAC CTTTTAATCT CGTTGGGTGG TACTGATACC
AAATCATTAG CCCTACCGCT ATCTAAAGCC CTATTAAAGA CTTTAAACCA ATGTCAGGTA
CAATTACTGT TGGGAAAACC TCATCAAGAT CAAATTGCCC TAGAAGCTCT GACACGAGAA
CAGGTAAATT TTTCACTTAT TTGCGACCCA CAATCTGTTG CTGAAGTGAT GACGCTATCA
GGATTAGCCA TATCGGCGGC AGGAGGAACC CTTGGAGAAT TAGCCAGCCA AGGCGTACCA
ACTCTTGCCT TGGTAACCGT CGACAACCAG CTACCAGCCT TAACCTCGCC CTTGAATAAT
ACCTGGTATC AGGCAATAGA TTGCCGGCAC TATGAACAAT CTGAGCCGGA GAGTGAAAGT
AACCTAGCGC TCATCAATGA AATAGCAACT CAGGCCTACG CACTTTGGCA TAATAAATGC
TGTCGACAAC TAATGAGTGA TAAGGCTCGT CAACTGATTG ACGGCCAAGG CTGCCAAAGA
GTAATAGATA GATTAGTTAT TGGCCTAGAA GAGAAGTCGA AACACCAATG A
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| Protein sequence | MVDSLPAKPK AAFYGNNSHR IGAGHIMRLY ALAEAAANQF DIWFVYKTCS DALLSKLKRA
NFNLLQISSS LTGSELKQHK FDTIIVDDYE LTGNEWHQLV STGSYLVKLD DALDDDPILA
DLIINPAPNC TQTDYQSRAP HANYCLGPHF TYLRREFTTC HFTPLMARPN LLISLGGTDT
KSLALPLSKA LLKTLNQCQV QLLLGKPHQD QIALEALTRE QVNFSLICDP QSVAEVMTLS
GLAISAAGGT LGELASQGVP TLALVTVDNQ LPALTSPLNN TWYQAIDCRH YEQSEPESES
NLALINEIAT QAYALWHNKC CRQLMSDKAR QLIDGQGCQR VIDRLVIGLE EKSKHQ
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