| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3075 |
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| Symbol | |
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| ID | 4174847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3708832 |
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| End bp | 3709953 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056101 |
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| Product | spore coat polysaccharide biosynthesis protein glycosyltransferase-like |
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| Protein accession | YP_662635 |
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| Protein GI | 109899380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
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| TIGRFAM ID | [TIGR03590] pseudaminic acid biosynthesis-associated protein PseG |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATA ATACGCACAA ACAGCAATGT ATTATTTTTC GAGTAGACGC GGGAGCGGAT
ATCGGTTTAG GGCACGTGAT GCGTTGCCTT GCATTAGCGC AAGGTTTACA TAGTCGCAAT
GTAAGAGCGG TATTTGCAGT GAGTCAGAAT AGTTTACAGC ATTGCCAAAA CCGCAGCGAC
TGGATGGGGG AGTTGTACGT TATTACTGCT AGCTCACGTT ATGATGAACA TCACGAATTA
CAGCAACTGT GTATTAAAGA GCAAGCTGAC TGGCTTATCT TAGATGGATA CCAATTTGAT
TCAGATTATC GAAAATTACT GGATTTAAAT ACCTGTAAAC TGGCTATGTT TGATGATGGC
CAGTTATTGG ACGCAGGTAT TAAAGATGAG CATTTATCCA TGATCATCAA CTGGGCGAGC
GGGGCAGATA AACTAAACTA TAACGACCTT GCTCCAAATG CATGGTGCTG TGCGGGTGAT
AGCTACCGTG TTCTTAGGCA AGAATTTTAT CAGGTGCAAA CACTCCCCTT TAATAAGCGT
AATCGCTTGA TCTTGATGTT CGGCGGTAGC GATCCAAGTC AGCTTACTTT GCCCTTGCTG
AAACTTTTTT CAGAATCTTC CATTCGACTT CCGATCACTA TCATTACAGG GAGTGGTTAT
CAGCATACTG ATGAGCTAGA AAAGTTTATA AAACACAGCC ACCTATCGAT AGAACACTTT
CATGACTGCC AGCAAGTAGC AGAAGTATTT CACCAGGGGC GTTTAGCTAT TTCGGCTGCC
GGTGCTAGCC AGTTTGAACT GTTACATTGT GCCACGCCTT CAATTTTTGT GGTCACGGCT
AAGAATCAAT TGTTCGCTAG TGAGCAGGCG AGAGGGCAGG GCTGGTGCTT TGTGAGTATT
AAAAATGCTC TGCAAGAGCA GCCAACATTT GAAATGAACG CCAAAGCATT ATTGCTTGAG
CAAATAGTAC AAAAATCGAT GGCACTGTGG CATCAACCAG AATTATTAAA CCAAATGCAT
AGCAATGCAT TATCTGCTCG TCAGCAAGCG GGATTTAATC GTATTTTTAC TGCACTTTAT
TCAAAGCTGC CTAATGAACC ACACGAGACT AACTTGCTAT GA
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| Protein sequence | MLDNTHKQQC IIFRVDAGAD IGLGHVMRCL ALAQGLHSRN VRAVFAVSQN SLQHCQNRSD
WMGELYVITA SSRYDEHHEL QQLCIKEQAD WLILDGYQFD SDYRKLLDLN TCKLAMFDDG
QLLDAGIKDE HLSMIINWAS GADKLNYNDL APNAWCCAGD SYRVLRQEFY QVQTLPFNKR
NRLILMFGGS DPSQLTLPLL KLFSESSIRL PITIITGSGY QHTDELEKFI KHSHLSIEHF
HDCQQVAEVF HQGRLAISAA GASQFELLHC ATPSIFVVTA KNQLFASEQA RGQGWCFVSI
KNALQEQPTF EMNAKALLLE QIVQKSMALW HQPELLNQMH SNALSARQQA GFNRIFTALY
SKLPNEPHET NLL
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