| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0611 |
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| Symbol | |
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| ID | 8418423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 732559 |
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| End bp | 734268 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645037179 |
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| Product | LmbE family protein |
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| Protein accession | YP_003197486 |
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| Protein GI | 258404744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3980] Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTGT TTAGAGCATC TTGTAGTCCA TTTATGGGAA CTGGACATCT CCAGCGGTGT
TTAATTTTGG CTCGAATTTT TCGAGATCAA GAAAGAACAG TATGTATAGT TACAGATGAC
AATGATTTGT CACGGAAGAT ATGTAATTCG TTTTCTCTAA CAACGGATTA TGTATTGTCA
GATACGCTGC TGCCAAATAA TTTTCTTGAA AATATTAATA CATTAATTTT AGACACTCCG
CAATCTGTTC AACCATTTTT GTATAACAAC TGTAATATAA GAAAATTATC AGAATTGAAC
GAAGCAGGGA TAAATATCGT TACCTTGGGT CATATTTCTC AAAATGCCTA TTTTATAAGA
ACAGTTATAG ACCTCTACCC CCATCAGGCA ATCTATGCAG CCAATTATCT TGAGGGCCCG
GATTTTCTCA TCCTGAGACC CGAGTTTAGC GAAGACCCAG GTCATGCTCA GAATGCAAAT
GAAGTTTTAG TCTGCATGGG GGGCAGCGAT CCCCATGATT TAACAGCAAT GGCTCTTGAC
TCTTTACATC AAGCCAGCTT TAAGGGGAAA GTTCGAGCCA TATTGGGACC TGGATATTCT
GAGATTAATG AAAAAAATCT ACGCCAAAAA TCTTCTCAAT ATGCTTTCTC TGTCCAACTA
GAACGCGACG TAAAAGACAT GCGGTCCAGA ATGAGGCAGG CTGCGTTTGG TTTTTCCGCC
TTTGGAACCA CTGCGTATGA AATGATGAGT CAGCGTCTGC CAGCCATGGT CTTTACCCAC
TATACATGGC AGTCCCCTTC AGCTCAACTC TTTGAAAAAC TGGGATGCTG TATTTACCTT
GGTTGTGCGG AATATGAAAT AAATCCGGTT TCTCTTACAA ATAAAGTTGC TCATTTTCTA
TCAGATAATG AGGCTGCAGC AAAAATGTCT GATAAAGGAA GATCTATAGT GGATGGATGT
GGGGCAAAGC GAATCGCAAA TATACTGGAA CAGCTGGAAG AAGAAAAGGG CAATCAGCAG
CTGGACATTG TCTACGTCCT AGCCCATCCC GGAGATGAGC TTTTCGGGGG CGGGGGCACA
CTTTTAAAGC AAATAAAGGC TGGCAAGAGA GTCGGTTTGA TTATCCTGGG CGAAGGGGTA
AGCAGTAGAA AAAGGGAAGA AGATGGCCAA GATTTTATTA TTACCGCCAG GAAAGAAATT
CGTTCATCTC TGCAAACAGT TGTTGACAAG ATTAATCTAA CAACTTGGTA TTATTATCGA
TTTGAAGACA ATCGTTTCGA CAGGCATGAT CTCTTGGATT TGGTAAAGGT TATAGAAACA
ATCTTCAAAA GGCATCGACC AAAAACGATC TATACCCACC ACCCAGGCGA TTTAAATATT
GATCACCGTC GCACTTTTGA AGCTGTTATT ACAGCTTCCA GACCGTCCGC AAATCAATCT
ATAAATAACA TTTACAGCAT TGAAATGCCT TCGTCCACGG ATTGGGGCAC CCCCCTTCAA
AAAGAGCCGT TTGTGCCCAA TGTTTTTGTG GATATCAGTG ATGTTTTGGA AGAAAAGATG
GATTTGCTTA CTCACTATTC TACGGAGATT TGCGAAGATC CTCATCCCAG ATCTTTTGCA
GGGATTCGAG ACAGGGCCAG GCAGTGGGGA AGAACGATTG GCAGGCAGGC TGCTGAAGCC
TTTGTGCTGC AGCGAGGCAT AAATGAATAG
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| Protein sequence | MIVFRASCSP FMGTGHLQRC LILARIFRDQ ERTVCIVTDD NDLSRKICNS FSLTTDYVLS
DTLLPNNFLE NINTLILDTP QSVQPFLYNN CNIRKLSELN EAGINIVTLG HISQNAYFIR
TVIDLYPHQA IYAANYLEGP DFLILRPEFS EDPGHAQNAN EVLVCMGGSD PHDLTAMALD
SLHQASFKGK VRAILGPGYS EINEKNLRQK SSQYAFSVQL ERDVKDMRSR MRQAAFGFSA
FGTTAYEMMS QRLPAMVFTH YTWQSPSAQL FEKLGCCIYL GCAEYEINPV SLTNKVAHFL
SDNEAAAKMS DKGRSIVDGC GAKRIANILE QLEEEKGNQQ LDIVYVLAHP GDELFGGGGT
LLKQIKAGKR VGLIILGEGV SSRKREEDGQ DFIITARKEI RSSLQTVVDK INLTTWYYYR
FEDNRFDRHD LLDLVKVIET IFKRHRPKTI YTHHPGDLNI DHRRTFEAVI TASRPSANQS
INNIYSIEMP SSTDWGTPLQ KEPFVPNVFV DISDVLEEKM DLLTHYSTEI CEDPHPRSFA
GIRDRARQWG RTIGRQAAEA FVLQRGINE
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