Gene Slin_4265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4265 
Symbol 
ID8728024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5148014 
End bp5149048 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content53% 
IMG OID 
Productpseudaminic acid biosynthesis-associated protein PseG 
Protein accessionYP_003389048 
Protein GI284039118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.514785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CCAACGCACC GAAGCTGATT TTTCGGGCCG ATGGGGGTGC TCAAATTGGG 
CTGGGCCACA TCATGCGCTG CCTGGCCATT GCCGACATGA CGGGCAACTT GTTCAGCCTG
TCGTTCGCTA TTCAGCAACC GTCAGATGCG GTTCGGGATT TATTGACACA AGCGGCCTTC
GGCATAATCA GTTTACCCGA AACAACCGAT TATGCAGTTG ATGCCGAACA CTTCAGCCGC
CACCTGACGG GCGACGAATT TGTGTTGCTC GACGGCTATT CCTTTGACGC GGCTTATCAG
CAGTTCATAA AACCCCACTG CCGGAAACTC ATTGTCGTTG ATGATCTGGT CGCCTGGCAC
CAATACGCCG ATGTGGTTAT CAATCATGGC GGAACTATAC AGGCAGCAGC TTATCAGGCA
GAAAACTACA CTCAATTCCT GACCGGAACC GCCTACGCCC TGCTCCGAAA GCCGTTTTTG
GAAGCAGGCA TCCACCGACC CGTTAGTACG CTAACCACAT TTCAACCCCG GCGGGTGCTG
GTCAATCTGG GCGGAGCCGA CCCCGACAAC ATAAGCCACC GGGTTGTAGA AAGCTTACTG
AACGAACCGT TGCTGGAGCA GATCGTTGTC GTATTGGGGG CCGCCAATCC ACACGGGAGC
AGTTTCGCCA GCTATACAAA GGAGCGGGTG CAGGTGCGAC GGCATCTATC GCCCGAACAG
ATGATTGCGG TGATTCAGGC CTGCGATATA GCCGTGGTGT CGTGCAGCAC CATTTCGTAT
GAGGTTGCCA CCGTTGGCAT ACCATTTGTT GGCATACTGA CGGCCGATAA CCAGGCTATT
CTCCGAACCT TTTACAAGGA TAACCACATT GCGCTGGCTG TACTGGAAAA AGCCTTTGCC
GGTTCTGAAC TCCGGGCTGC CTTATCGCTA TCGATTTCGG CAGTAAATGA CAGTCTGTCC
AATCAGCGTC AATTTTTTGA TGGTCGATCA GGCGAGCGAA TCACAGCTTT TTTCCGAACA
TTGCTGCCAG CTTAA
 
Protein sequence
MTDTNAPKLI FRADGGAQIG LGHIMRCLAI ADMTGNLFSL SFAIQQPSDA VRDLLTQAAF 
GIISLPETTD YAVDAEHFSR HLTGDEFVLL DGYSFDAAYQ QFIKPHCRKL IVVDDLVAWH
QYADVVINHG GTIQAAAYQA ENYTQFLTGT AYALLRKPFL EAGIHRPVST LTTFQPRRVL
VNLGGADPDN ISHRVVESLL NEPLLEQIVV VLGAANPHGS SFASYTKERV QVRRHLSPEQ
MIAVIQACDI AVVSCSTISY EVATVGIPFV GILTADNQAI LRTFYKDNHI ALAVLEKAFA
GSELRAALSL SISAVNDSLS NQRQFFDGRS GERITAFFRT LLPA