24 homologs were found in PanDaTox collection
for query gene Sala_2486 on replicon NC_008048
Organism: Sphingopyxis alaskensis RB2256



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008048  Sala_2486  LuxR family transcriptional regulator  100 
 
 		 191 aa  383  1e-106  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.502377 
 
 
-
 
NC_007794  Saro_1238  LuxR family transcriptional regulator  35.03 
 
 		 167 aa  69.7  0.00000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.233099  n/a   
 
 
-
 
NC_009511  Swit_3181  sigma-70, region 4 type 2  43.21 
 
 		 198 aa  53.9  0.000001  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.718731 
 
 
-
 
NC_009511  Swit_0394  regulatory protein, LuxR  37.89 
 
 		 185 aa  52.4  0.000004  Sphingomonas wittichii RW1  Bacteria  normal  0.0417194  normal  0.0540308 
 
 
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NC_008391  Bamb_4255  LuxR family transcriptional regulator  32.65 
 
 		 227 aa  48.9  0.00004  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0102406 
 
 
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NC_010552  BamMC406_4781  LuxR family transcriptional regulator  31.63 
 
 		 227 aa  46.6  0.0002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0502492  normal  1 
 
 
-
 
NC_013093  Amir_6098  two component transcriptional regulator, LuxR family  37.14 
 
 		 218 aa  45.8  0.0004  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_0348  putative GAF sensor protein  41.18 
 
 		 341 aa  44.7  0.0007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.858795 
 
 
-
 
NC_012856  Rpic12D_1738  two component transcriptional regulator, LuxR family  32.89 
 
 		 219 aa  43.9  0.001  Ralstonia pickettii 12D  Bacteria  normal  0.0459515  normal  0.949758 
 
 
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NC_010682  Rpic_2046  two component transcriptional regulator, LuxR family  32.1 
 
 		 219 aa  44.3  0.001  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_2151  two component LuxR family transcriptional regulator  36.67 
 
 		 264 aa  43.5  0.002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.104213 
 
 
-
 
NC_009425  Ent638_4204  two component LuxR family transcriptional regulator  35.94 
 
 		 202 aa  43.1  0.002  Enterobacter sp. 638  Bacteria  hitchhiker  0.00789571  normal  1 
 
 
-
 
NC_008148  Rxyl_1953  two component LuxR family transcriptional regulator  38.57 
 
 		 208 aa  43.1  0.002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.160868  n/a   
 
 
-
 
NC_008048  Sala_2898  LuxR family transcriptional regulator  29.8 
 
 		 166 aa  43.9  0.002  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2604  transcriptional regulator, LuxR family  36 
 
 		 74 aa  43.1  0.002  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3347  two component LuxR family transcriptional regulator  35.94 
 
 		 234 aa  42.4  0.004  Methylobacterium sp. 4-46  Bacteria  normal  0.563314  normal  1 
 
 
-
 
NC_013159  Svir_03250  NADH dehydrogenase subunit J  32.53 
 
 		 304 aa  42  0.005  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  40.68 
 
 		 214 aa  42  0.005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.749326 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  31.87 
 
 		 221 aa  42  0.006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  40.68 
 
 		 221 aa  41.6  0.008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0403461 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  37.5 
 
 		 203 aa  41.2  0.008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal  1 
 
 
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NC_009523  RoseRS_0799  response regulator receiver protein  35.38 
 
 		 204 aa  41.6  0.008  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.403434 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  40 
 
 		 216 aa  41.2  0.009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5781  response regulator receiver protein  36 
 
 		 243 aa  41.2  0.009  Sinorhizobium medicae WSM419  Bacteria  normal  0.305702  hitchhiker  0.00700374 
 
 
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