| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0394 |
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| Symbol | |
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| ID | 5197677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 421104 |
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| End bp | 421661 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579933 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001260901 |
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| Protein GI | 148553319 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0417194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0540308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGTATT TTTCCCCCAT GAGCATCGAG GCCATCAGCA AACTGACCGC CAGGCAGCGC
GACTGCCTGC GCCTCGTGCT CCATCACAAG CAGTCGAAGG AAATCGGCCG CGAGCTCGGC
ATTTCGCCGA TGACCGTGGA CAATCATTTC CGCAGCGCGA TCCAGACGCT GGGCGTCTCC
AACCGCCTCG AAGCCGCGCT GATGCTGGCC TCCCACGAGG GCGACGAGCC TAGTCAGCGA
TTGACTAGTC AACCGCACCC CGTTGTTTCC CCGGCCGAAA GTTCCATCAT GGCCTCGTCG
TCGGACATCG GTGACGGGCA GAGGGAAATG ACGAGCGCCC TTCGAGAAGA CCAGGTTCCC
TACAGGACCT ATCGCGAAGC GAGCTTCATC GATTTCCCCT TGCCGGTGCC AACCAGGGGG
AAGCCACGCA ATGACCTGTC GATCGCCCAG CGTCTGTTCT GGATCGCCAT ACTGATCTTT
GGAATGGGAC TGGGGGCCGG CGCGTTGCTG TCTGGCTTCG CCGCTCTGAC GAACATCGCC
CTGGCGCTCA AGCACTAG
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| Protein sequence | MRYFSPMSIE AISKLTARQR DCLRLVLHHK QSKEIGRELG ISPMTVDNHF RSAIQTLGVS
NRLEAALMLA SHEGDEPSQR LTSQPHPVVS PAESSIMASS SDIGDGQREM TSALREDQVP
YRTYREASFI DFPLPVPTRG KPRNDLSIAQ RLFWIAILIF GMGLGAGALL SGFAALTNIA
LALKH
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