Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5781 |
Symbol | |
ID | 5320083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 754896 |
End bp | 755627 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640777488 |
Product | response regulator receiver protein |
Protein accession | YP_001314420 |
Protein GI | 150377825 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.305702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00700374 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCAACC ACCGTAGACT GTCAGCGTCG TTAAGGACGC TTCAGGCAGC GAAGCATCGC GCGGACCTTC AGTCCGCATT GGGCGAACTT TGCGAGCACT ACGGCGTGTC GCACATGACA ATTCTTGTGG TTTGCAGCGG TGGCAGATCG GGCTCGTACC CCTATTGTTG CACGACGTAT CCGGAACGGT GGACGGAAAA ATACGTCGGC AAGTGCTTTT TCGAAATAGA CCCGGTGATC GACGTGATTC GGTGGGGGTT CCTCCCGGTG GACTGGTCCT CTCTCGATCG GCGATCAGAA CAGGCCCACC GCTTGTTTAA GGAAGCTCGT TTGTACGATA TCGGCCCTCA TGGCCTGACG ATCCCAATCC GGGGTCCTAA AGGCGAACGA TGTCTCCTCT CCGTGACGTC GAACCTACCC GGGCGCCATT GGTCACGGCT ACGCGCTTCG AGTATTCACG AACTTCAGAT CCTTTCCCAC TATCTTCATG AGACCGTGCT TTCTGCCAGC GGTCTGCGAG GGACCGACCG TTATCGGAAC CTCTCCAGGC GCGAAAGTCA GTGCTTCCAG TTGCTTGCAA CAGGTCGGAT TTCTAAGCAG ATAGCAGCGG ACCTCGGCAT CTCGGAGAAC GCCGTGAAAT TGTACCTGCG TTCGGCAAGG ATGAAGCTGG GAGCTGCTAC AAGTCATCAG GCCGTTGCCC GGGCGAGCTT CCTCGAGTTG ATCAAGATCT GA
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Protein sequence | MVNHRRLSAS LRTLQAAKHR ADLQSALGEL CEHYGVSHMT ILVVCSGGRS GSYPYCCTTY PERWTEKYVG KCFFEIDPVI DVIRWGFLPV DWSSLDRRSE QAHRLFKEAR LYDIGPHGLT IPIRGPKGER CLLSVTSNLP GRHWSRLRAS SIHELQILSH YLHETVLSAS GLRGTDRYRN LSRRESQCFQ LLATGRISKQ IAADLGISEN AVKLYLRSAR MKLGAATSHQ AVARASFLEL IKI
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