13 homologs were found in PanDaTox collection
for query gene Rsph17025_0467 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009428  Rsph17025_0467  rhomboid family protein  100 
 
 		 228 aa  439  9.999999999999999e-123  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.0830945 
 
 
-
 
NC_009049  Rsph17029_0456  rhomboid family protein  89.47 
 
 		 228 aa  363  1e-99  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.10013  normal  1 
 
 
-
 
NC_009952  Dshi_2835  hypothetical protein  50.91 
 
 		 227 aa  209  4e-53  Dinoroseobacter shibae DFL 12  Bacteria  hitchhiker  0.00353062  normal  1 
 
 
-
 
NC_008044  TM1040_0444  rhomboid-like protein  51.1 
 
 		 228 aa  205  5e-52  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008687  Pden_3954  rhomboid family protein  50.21 
 
 		 237 aa  203  2e-51  Paracoccus denitrificans PD1222  Bacteria  normal  0.0843422  normal  1 
 
 
-
 
NC_007802  Jann_0895  rhomboid-like protein  49.56 
 
 		 227 aa  189  2e-47  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.402986 
 
 
-
 
NC_009429  Rsph17025_3232  protein tyrosine phosphatase  31.16 
 
 		 225 aa  58.5  0.00000009  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007494  RSP_3327  rhomboid family membrane protein  30.3 
 
 		 219 aa  52  0.000008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0229306  n/a   
 
 
-
 
NC_009050  Rsph17029_4052  rhomboid family protein  29.8 
 
 		 219 aa  48.5  0.00008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0629739  normal  1 
 
 
-
 
NC_007801  Jann_4233  rhomboid-like protein  23.5 
 
 		 211 aa  47.4  0.0002  Jannaschia sp. CCS1  Bacteria  normal  0.386042  normal  1 
 
 
-
 
NC_012669  Bcav_0020  Rhomboid family protein  30.95 
 
 		 315 aa  46.6  0.0003  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002976  SERP1114  rhomboid family protein  27.07 
 
 		 486 aa  43.1  0.004  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2850  Rhomboid family protein  29.08 
 
 		 271 aa  42  0.007  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
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