| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0456 |
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| Symbol | |
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| ID | 4896382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 473178 |
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| End bp | 473864 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640111040 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001042344 |
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| Protein GI | 126461230 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.10013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACA ATTACAATGC CTCGCCGGTC AATCCGATGC CGGCGGTGGT CTGGTTGCTG
GCCCTGCCGA TCGTCGCCAT GGAAGCCGTG GTGGCGCTCG GCGCGAGCGG GATCGTGGGC
GGCGGCGCGG GCGCGGGCTG GCGGCTCGAC GCCTGGCAGC GGTTCGCCTT CTCGCCCGAC
CTCATGCGGG CGATGCTTGA GACCCACACC TATCCCTGGC AGGGGATGAT CCGGCTGGTC
TCCTATCCGC TGGTCCACGC CACCTTTCTC CATGCGCTGA TGGCGGTGGT GATCCTGCTC
GCGCTCGGCA AGATGGTGGG CGAGGTGTTC CGGCCCTGGG CGGTGGCGGC GGTCTTTCTC
GGTGCCGCCG TGGTCGGGGC GCTGGCCTAT GCGGCGATCC CGGGCGTGCG GGCGCCGCTG
ATCGGCGCCT ATCCGGCCGA TTACGGGCTG GTGGGGGCCT TCACCTTCCT GATCTGGACG
CGTCTTGCCG CGACGGGAGG CAACCAGTAC CGCGCCTTCT CGCTGATCGG GATGCTGCTC
GGCATCCAGC TTCTGTTCGG GCTCTTCTTC GGCGGCGGCT ACGAATGGGT GGCCGATCTC
GCGGGCTTCG CGACGGGGTT CCTGCTGTCC TTTGCCGTCA GCCCCGGCGG CTGGGCGCGG
GTGAAGGAGA AGCTGCGCCG TCGCTGA
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| Protein sequence | MRDNYNASPV NPMPAVVWLL ALPIVAMEAV VALGASGIVG GGAGAGWRLD AWQRFAFSPD
LMRAMLETHT YPWQGMIRLV SYPLVHATFL HALMAVVILL ALGKMVGEVF RPWAVAAVFL
GAAVVGALAY AAIPGVRAPL IGAYPADYGL VGAFTFLIWT RLAATGGNQY RAFSLIGMLL
GIQLLFGLFF GGGYEWVADL AGFATGFLLS FAVSPGGWAR VKEKLRRR
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