10 homologs were found in PanDaTox collection
for query gene TM1040_0444 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_0444  rhomboid-like protein  100 
 
 		 228 aa  446  1.0000000000000001e-124  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2835  hypothetical protein  56.44 
 
 		 227 aa  252  3e-66  Dinoroseobacter shibae DFL 12  Bacteria  hitchhiker  0.00353062  normal  1 
 
 
-
 
NC_007802  Jann_0895  rhomboid-like protein  47.79 
 
 		 227 aa  195  6e-49  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.402986 
 
 
-
 
NC_009428  Rsph17025_0467  rhomboid family protein  51.1 
 
 		 228 aa  186  3e-46  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.0830945 
 
 
-
 
NC_009049  Rsph17029_0456  rhomboid family protein  50.22 
 
 		 228 aa  184  1.0000000000000001e-45  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.10013  normal  1 
 
 
-
 
NC_008687  Pden_3954  rhomboid family protein  40.09 
 
 		 237 aa  152  2.9999999999999998e-36  Paracoccus denitrificans PD1222  Bacteria  normal  0.0843422  normal  1 
 
 
-
 
NC_009952  Dshi_3383  rhomboid family protein  28.11 
 
 		 234 aa  54.7  0.000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009429  Rsph17025_3232  protein tyrosine phosphatase  29.86 
 
 		 225 aa  51.6  0.00001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007801  Jann_4233  rhomboid-like protein  24.32 
 
 		 211 aa  47.8  0.0001  Jannaschia sp. CCS1  Bacteria  normal  0.386042  normal  1 
 
 
-
 
NC_007494  RSP_3327  rhomboid family membrane protein  25.91 
 
 		 219 aa  43.5  0.003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0229306  n/a   
 
 
-
 
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