| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0467 |
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| Symbol | |
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| ID | 5082826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 462677 |
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| End bp | 463363 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640482020 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001166678 |
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| Protein GI | 146276519 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0830945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACA ATTACAACGC CCCGCCGGTC AATCCGCTGC CGGCCGTGGT CTGGCTGCTC
GCCCTGCCGA TCATCGCCGT GGAGGCGGTC GTGGCGCTGG GGGCGAGCGG GATCGTGGGG
GGCGGTGCGG GGGCCGGCTG GCGGCTGGAC GCCTGGCAGC GGTTCGCCTT CTCGCCCGAC
CTGATGCGCG CGATGATCGA GACCCAGACC TTCCCCTGGC AGGGGATGAT CCGGCTGGTG
ACCTATCCGC TCGTTCACGC CACCTTCCTC CATGCGCTGA TGGCGGTGGT GATCCTGCTC
GCGCTTGGGA AGATGGTGGG TGAGGTGTTC CGGCCCTGGG CGGTGGCGGC GGTCTTCCTC
GGCTCGGCCG TCGCGGGGGC GCTGGCCTAC ACCGCGCTGC CGGGGGTGAG GGCGCCGCTG
ATCGGCGCCT ATCCGGCCGA CTACGGGCTG GTGGGCGCCT TCACCTTCCT GCTCTGGACC
CGGCTCGCCA CGACAGGCGG CAACCGCTAC CGCGCCTTCA CCCTGATCGG GTTGCTGCTC
GGCATCCAGC TTGTCTTCGG GCTGCTGTTC GGCGGCGGCT ACGAATGGGT GGCCGATCTC
GCGGGCTTTG CCACGGGCTT CCTGATCTCC TTCGCCGTCA GCCCCGGCGG CTGGGCCCGC
GTGAGGGACA TGGTCCGCCG GCGCTGA
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| Protein sequence | MRDNYNAPPV NPLPAVVWLL ALPIIAVEAV VALGASGIVG GGAGAGWRLD AWQRFAFSPD
LMRAMIETQT FPWQGMIRLV TYPLVHATFL HALMAVVILL ALGKMVGEVF RPWAVAAVFL
GSAVAGALAY TALPGVRAPL IGAYPADYGL VGAFTFLLWT RLATTGGNRY RAFTLIGLLL
GIQLVFGLLF GGGYEWVADL AGFATGFLIS FAVSPGGWAR VRDMVRRR
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