| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4233 |
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| Symbol | |
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| ID | 3932385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | - |
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| Start bp | 19228 |
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| End bp | 19863 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637902290 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_512173 |
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| Protein GI | 89057719 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.386042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAC CTGAGGTGCG GGGCAGGGGG CTGATCTGGG CGCTCATTGC CCTTTGCGCT
TTGGTTGAGA TCACCTTGTT TCTGGCCGAC CAAGGTTTTC TGGGGTCAGA TCGCCTTCGT
CAGACAGCCT ATGAATGGGG TGGGTTCTGG CCGGGCCTTC TCCAGGGATG GTCGGCAAAC
TATCCCGGGC AGCCCGTGGC GATGTTTTTC ACCTATGGTT TTCTGCATGG CGGACCGGTG
CATCTGATCG TCAACATGGT GACGCTCTGG TCCCTTGGAT ATGCGGTGCT GGAGCGGGTC
GGTCTTTGGG GCTTTATGGC GCTTTACGGC GCATCGCTTC TTGGAGGTGC AATGGGTTTT
GGCCTGATCG CAGAGACCTT CCGGCCGATG GTGGGGGCTT CGGGCGCCCT ATTCGGTCTG
GCGGGCGGAT TGCTGGCCTG GAACTACGTC GACCGCTTCA CCTTCCGCGA GGGTCTATGG
CCAGTGGTGC GGCTGGTTGC GTTTCTGGTT GCGATGAATG TGGCAATGTG GTGGGCGCTT
GACGGTCAAC TGGCATGGGA GACACATCTG GGGGGGTTCA TTGTCGGATG GCTCGCAGCG
CTGCTGATTG ATCCGCGGAG CCGGGAAACC ACGTAG
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| Protein sequence | MTQPEVRGRG LIWALIALCA LVEITLFLAD QGFLGSDRLR QTAYEWGGFW PGLLQGWSAN
YPGQPVAMFF TYGFLHGGPV HLIVNMVTLW SLGYAVLERV GLWGFMALYG ASLLGGAMGF
GLIAETFRPM VGASGALFGL AGGLLAWNYV DRFTFREGLW PVVRLVAFLV AMNVAMWWAL
DGQLAWETHL GGFIVGWLAA LLIDPRSRET T
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