| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2835 |
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| Symbol | |
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| ID | 5710686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2993548 |
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| End bp | 2994231 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268761 |
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| Product | hypothetical protein |
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| Protein accession | YP_001534169 |
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| Protein GI | 159045375 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00353062 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCG AGCCGCAATC GCCCTTCAAT CCGCTGCCGC CGCTGGTGGT GGCGCTCGCG
GTCGTGATCC TGGGGATCGA GGCGCTGTTC TCGCTGGGCG CGCGCGGCAT CCTCGGCGGC
CCGGAGGCGG TGGGCTGGCG GATCGCGGCG ATCCGGGATT TCGGCTTCGT CGACCAGGTG
TTCGACTGGA TGCTGGCCAA TGGGCGCTTT CCGCCGGAGC AGTTGGCGCG GGTCGTGACC
TATCCGCTGA TCCACGCGAG CTTCACCCAT GCGGTCTTCG TGGTGATCTT CGTGCTGGCC
ATGGGCAAGA TGGTGTCCGA GGTGTTCGGG GGGCTTGCGT TCCTGACGAT CTTCTGGGTT
TCGGCGGTGG TGGGCGCGCT GGTCTACGGG CTGTTTCTGA ACGAGGATCT GCCGCTGATC
GGGGGGTATC CGGGGGTCTA TGGGCTGATC GGGGCCTATA CCTTCCTGCT GTGGGTGTCG
CTGATCGCCA CGGGCGGGCA GCAATATCGG GCCTTCACGC TGATCGGGAT GCTTCTGGGC
ATCCAGCTGT TCTTCGCGAT CTTCTTCGAG GTGGGGATGG ATTGGGTCGC GGACCTGTCG
GGTTTCGTGG CGGGGTTCGG GCTGTGTTTC CTGATCGCGC CGGGGGGGTG GGGCCGGGTG
ATGGCCAAGC TGCGCGGGCG TTAG
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| Protein sequence | MTPEPQSPFN PLPPLVVALA VVILGIEALF SLGARGILGG PEAVGWRIAA IRDFGFVDQV
FDWMLANGRF PPEQLARVVT YPLIHASFTH AVFVVIFVLA MGKMVSEVFG GLAFLTIFWV
SAVVGALVYG LFLNEDLPLI GGYPGVYGLI GAYTFLLWVS LIATGGQQYR AFTLIGMLLG
IQLFFAIFFE VGMDWVADLS GFVAGFGLCF LIAPGGWGRV MAKLRGR
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