| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0020 |
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| Symbol | |
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| ID | 7858222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 20631 |
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| End bp | 21578 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643864097 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002880048 |
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| Protein GI | 229818522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGGT TCGGCGGGTA CGGCGCCGCG CCGCCGCCCG GTGGCACGCC CCCGCCCGGG
GGGTACGGCG CCGTACCCCC GGGCGAACAG CCGCCGGGTC AGGGTGTGCC GTCGTACGGG
GTGTCGGCGC CGGTGTGCCC GCGCCACCCC GACCGGATCT CGTACGTCAC GTGCCAGCGC
TGCGGGCGAC CGGTGTGCCC CGAGTGCCAG CGGCCCGCAG CCGTGGGTGT GCAGTGCGTG
GACTGCGTGC GCGAGGCGCG GTCCCGGACC CCGCGCACGC GGACCCCTCT CGGCGGGCGG
GCGCGCGCGG GGCGGCCGGT GATCACGCTG ACGATCATCG TCATCTGCGC GGCGATCGAG
CTGCTGCGGT ACGTGGCGCC GGGGCTGTAC TCCGAGGTGT ACCAGGCGAT GGCGTTCTCG
GCGGCCATCG GCGAGGTGCA GCCGTACCGG TTCCTCTCCG CCGCGTTCCT GCACGGCGGG
CTGCTCCACC TGGCGTTCAA CATGTACGCG CTCTGGATCG TGGGCGGCTT CCTCGAGCAG
ATGCTCGGCC GCTGGCGGTA CGCGGCCCTG TTCCTGCTGA GCGCGATCGG TGGGTCGGTC
GGGTACCTGC TGCTCGCCGA CCCCTTGTCC CGTGCGTGGA CGATCCCGGT GGTCGGGGCG
TCCGGCGCCG TGTTCGGGCT GTTCGCCGCG ATCGTGTTCG TGCTGCGCAG CACGGGCCGG
AATGCGTCGC AGATCCTCGT GCTCATCGCG ATCAACGTGG TCATCGGCTT CGTCGTGCCG
GGCATCGCAT GGCAGGCGCA CCTCGGCGGC ATGGTGACGG GCGCGCTGCT CGCCGTCGCG
TTCGTGTACG CGCCGCCGCG GATCCGGTCG TGGTCGAGTC CCGCGGCGTG CGTGGCGGTG
GCGGTGCTGC TGGTCGTTGC GTCGTTCGCG AAGTACGCCG CCGTCTGA
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| Protein sequence | MSGFGGYGAA PPPGGTPPPG GYGAVPPGEQ PPGQGVPSYG VSAPVCPRHP DRISYVTCQR
CGRPVCPECQ RPAAVGVQCV DCVREARSRT PRTRTPLGGR ARAGRPVITL TIIVICAAIE
LLRYVAPGLY SEVYQAMAFS AAIGEVQPYR FLSAAFLHGG LLHLAFNMYA LWIVGGFLEQ
MLGRWRYAAL FLLSAIGGSV GYLLLADPLS RAWTIPVVGA SGAVFGLFAA IVFVLRSTGR
NASQILVLIA INVVIGFVVP GIAWQAHLGG MVTGALLAVA FVYAPPRIRS WSSPAACVAV
AVLLVVASFA KYAAV
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