| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4052 |
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| Symbol | |
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| ID | 4898557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009050 |
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| Strand | - |
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| Start bp | 1204250 |
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| End bp | 1204909 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640114656 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001045902 |
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| Protein GI | 126464789 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0629739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACT CCCAGAATCG CCGCACGGGC CCGCTTTCCT CTTCCACCGC CGGAGCCCCC
GGCTACATCT GGGCTCTGGT CGGCAGTCTC GCCCTCATCG AGCTCGTGCT GACGGCTGCC
GATGCCGGCT GGGTGGGCGA TCCGCGCTGG CGGACGATGG CGCTGCTGCT CGGGGCCTTC
TGGCCGCCGT TGCTGGCGCC CGGGGCGGGC GAGCTCTATC CGCTCCAGCG CGAGGCGATG
TTCCTCACCC ACGCCTTCCT CCATGCGAAC TTCCTGCACA TGGTGATGAA CGGGGTGATC
CTTTTGTCGC TCGGCAAGGT GATCAGCGAG AAGGTGGGCG CCGTCCGCAC CTACCTGCTG
TTCGGTGCCT CGGCGGTCGC AGGCGGCGCG GCCTTCGGGC TGATCTCGAT GTCGAGCGGG
CCGATGATCG GCGCCTCGGG CGCGGCCTTC GGATTCCTCG GCATCTGGAA CGCCTGGGAT
TTCCAGCGGC GGAAGGCGCT GGGGCTGTCG CTGCGGCCGA TTCTCAACAT GATCCTGGGT
CTGGCCATAG CGAACATCGC GCTCTTCGTC TTCCTGCAGG GCGGCCTCGC CTGGGAGGCG
CATCTGGGCG GCTATCTCAT GGGGTGGGCC GCGGCCTTCA CCTTCGCCCG CCTGCGCTGA
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| Protein sequence | MSHSQNRRTG PLSSSTAGAP GYIWALVGSL ALIELVLTAA DAGWVGDPRW RTMALLLGAF
WPPLLAPGAG ELYPLQREAM FLTHAFLHAN FLHMVMNGVI LLSLGKVISE KVGAVRTYLL
FGASAVAGGA AFGLISMSSG PMIGASGAAF GFLGIWNAWD FQRRKALGLS LRPILNMILG
LAIANIALFV FLQGGLAWEA HLGGYLMGWA AAFTFARLR
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