| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1114 |
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| Symbol | |
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| ID | 3242888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | - |
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| Start bp | 1153332 |
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| End bp | 1154792 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 637167767 |
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| Product | rhomboid family protein |
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| Protein accession | YP_188690 |
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| Protein GI | 57867074 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTA ATAAACTTTA TTGGAAGGCT TTATACTACT GGATTAGGTA TCTTAATTAT
AATGTAATTT ATCGTGATAA AGAGGACGAT GAAATATGGT TGTCTCATAA GAGAAAACAT
TCAATTGTTG TATTTAGAAA AGATGTCACA TCTACCCAAG AGATTAGGTT TGATAAATCA
AAAATTATGG AACGACCTGA AGAAATACAA CAATTCATCG GTTATATACC TGAATCTTAT
GAATTTTATT ATTTTACGGA TAAAGAGCTT TCAAAAGAAA ATTTAAATGA AGAAAAACCA
ATTAAACTGA AATTTAAAAT TATAAGCAAT GAGCAAAGCT TAAATTCACT CCCTATAAAC
TTTTTACTTT TAAAAATGCT AATTAATAAT GAAGATAAAA GGACTTACCT TCATTACAAA
AGAAAAGTTT TAACACAAAA TCTTGTTGAT AAACATATGC AACGTTTTAC CCCTATTACA
TATACACTTA TCTTAATTAA TATTGTGATA TGGTTATGTA TGATTTTATA CTTAAATCGA
TTTTCTGATG TTAAACTATT AGAAGTAGGT GGACTTGTTC ATTTTAATGT TGTTCACGGA
GAATGGTATA GACTTATTTC GTCAATGTTT TTACATTTTA ATTTCGAACA CATTTTAATG
AATATGCTCT CTCTATTTAT TTTTGGTAAA ATTGTCGAAT CAATCATTGG ATCATGGCGA
ATGCTAATAA TTTATATAAT ATCCGGATTA TATGGAAATT TTGTTTCTCT ATCATTTAAT
ACGACTACAA TTTCAGTCGG TGCTAGTGGA GCAATATTTG GTCTAATTGG TTCTATTTTT
GTGATTATGT ATTTAAGCAA GAATTTTAAT AAAAAAATGA TTGGCCAGTT ATTAATTGCT
TTGGTTGTTT TAATCGTTTT TTCACTTTTT ATGTCTAATA TTAATATAAT GGCACATTTA
GGTGGATTTA TCAGTGGTGT ATTAATTACA TTAATAGGCT ATTATTTCAA AACACAACGC
TCTTTATTTT GGTCATTTTT GATTGTATTT TTACTTATAT TCATCATTTT ACAAATTAGA
ATATTTACTA TAAGTGAGGA TAATATCTAT GATAAATTAA TTCGGGATGA AATGATTAAA
GGTAATTATA GCGAAGCAAA AAATGTTGTA AAACAAACAC TTAATAATAA TTACGCCGAT
GATGAAACAT ATTACCTTAG TGGTTTGATT ACTGCAACTA AGAGTTCGCA AGCAGAGGCC
GTATCAGAAT GGGAAAGAGG TTTAAGAAAA TTTCCAAATT CAGGTGTACT TAATTATGAA
TTAGCTATAG CTAATCGTTC TTTAAGTGAT GATAAAAAGG CTTTAAAATA TATAAAAAAA
GCTGTAGCAA TTAATCCTAA TAATAAAAAA TATGTTAATT TAAAAAAAGA GTTGAGTAAA
TCTAATGACA CGAAAAATTA A
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| Protein sequence | MNINKLYWKA LYYWIRYLNY NVIYRDKEDD EIWLSHKRKH SIVVFRKDVT STQEIRFDKS
KIMERPEEIQ QFIGYIPESY EFYYFTDKEL SKENLNEEKP IKLKFKIISN EQSLNSLPIN
FLLLKMLINN EDKRTYLHYK RKVLTQNLVD KHMQRFTPIT YTLILINIVI WLCMILYLNR
FSDVKLLEVG GLVHFNVVHG EWYRLISSMF LHFNFEHILM NMLSLFIFGK IVESIIGSWR
MLIIYIISGL YGNFVSLSFN TTTISVGASG AIFGLIGSIF VIMYLSKNFN KKMIGQLLIA
LVVLIVFSLF MSNINIMAHL GGFISGVLIT LIGYYFKTQR SLFWSFLIVF LLIFIILQIR
IFTISEDNIY DKLIRDEMIK GNYSEAKNVV KQTLNNNYAD DETYYLSGLI TATKSSQAEA
VSEWERGLRK FPNSGVLNYE LAIANRSLSD DKKALKYIKK AVAINPNNKK YVNLKKELSK
SNDTKN
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