24 homologs were found in PanDaTox collection
for query gene Rfer_4404 on replicon NC_007901
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007901  Rfer_4404  response regulator receiver domain-containing protein  100 
 
 		 328 aa  686    Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_4047  response regulator receiver domain-containing protein  31.85 
 
 		 350 aa  159  5e-38  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.251517 
 
 
-
 
NC_007949  Bpro_5019  response regulator receiver domain-containing protein  30.63 
 
 		 328 aa  159  8e-38  Polaromonas sp. JS666  Bacteria  normal  0.618067  normal  1 
 
 
-
 
NC_008781  Pnap_3514  response regulator receiver protein  29.91 
 
 		 342 aa  157  3e-37  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.95841  normal  1 
 
 
-
 
NC_008757  Pnap_4354  response regulator receiver protein  29.55 
 
 		 328 aa  150  2e-35  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.508618 
 
 
-
 
NC_007509  Bcep18194_C7079  response regulator receiver domain-containing protein  31.85 
 
 		 312 aa  71.6  0.00000000002  Burkholderia sp. 383  Bacteria  normal  1  normal  0.805189 
 
 
-
 
NC_012856  Rpic12D_2563  response regulator receiver protein  23.62 
 
 		 345 aa  69.7  0.00000000007  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.232124 
 
 
-
 
NC_010682  Rpic_2973  response regulator receiver protein  23.62 
 
 		 345 aa  69.3  0.00000000008  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc2734  response regulator transcription regulator protein  23.23 
 
 		 345 aa  67.8  0.0000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_4504  response regulator receiver protein  29.7 
 
 		 320 aa  67.8  0.0000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A2827  response regulator receiver  24.19 
 
 		 348 aa  66.6  0.0000000006  Ralstonia eutropha JMP134  Bacteria  normal  0.0210886  n/a   
 
 
-
 
NC_007952  Bxe_B0823  response regulator receiver domain-containing protein  29.27 
 
 		 320 aa  63.9  0.000000004  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.526034 
 
 
-
 
NC_007973  Rmet_2966  response regulator receiver domain-containing protein  22.98 
 
 		 349 aa  61.2  0.00000003  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007953  Bxe_C0017  response regulator receiver domain-containing protein  23.68 
 
 		 333 aa  58.5  0.0000001  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.93116 
 
 
-
 
NC_006368  lpp2788  hypothetical protein  36.47 
 
 		 341 aa  57.4  0.0000003  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2657  hypothetical protein  36.47 
 
 		 341 aa  57.4  0.0000003  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007643  Rru_A0376  putative two-component response-regulatory protein YehT  28.57 
 
 		 238 aa  48.1  0.0002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_3416  putative two-component response-regulatory protein YehT  36.49 
 
 		 237 aa  45.8  0.001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.329348  normal  0.0577965 
 
 
-
 
NC_010524  Lcho_2717  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  23.61 
 
 		 720 aa  44.7  0.002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00595541 
 
 
-
 
NC_013440  Hoch_1901  adenylate/guanylate cyclase  35.79 
 
 		 381 aa  43.9  0.004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.500403  normal  1 
 
 
-
 
NC_007925  RPC_0827  acetoacetate metabolism regulatory protein AtoC  28 
 
 		 460 aa  43.1  0.006  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.158461 
 
 
-
 
NC_010501  PputW619_4590  two component LuxR family transcriptional regulator  36.36 
 
 		 258 aa  43.1  0.006  Pseudomonas putida W619  Bacteria  normal  1  normal  0.038066 
 
 
-
 
NC_009457  VC0395_A0934  putative chemotaxis protein CheY  30.3 
 
 		 158 aa  42.7  0.008  Vibrio cholerae O395  Bacteria  normal  0.0812215  n/a   
 
 
-
 
NC_007519  Dde_0161  LytR/AlgR family transcriptional regulator  28.4 
 
 		 270 aa  42.4  0.01  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
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