| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2734 |
|---|
| Symbol | |
|---|
| ID | 1221581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 2941780 |
|---|
| End bp | 2942817 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637239135 |
|---|
| Product | response regulator transcription regulator protein |
|---|
| Protein accession | NP_520855 |
|---|
| Protein GI | 17547453 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGG ACAACGCCCT GCCGGTCTAT TTCCACCCGA CCCTCACCGT GGTGGTCGAC
GACAGCCAGT CCTTTGTCGA AAGCCTCGGG TTCCAGATGG ACCCGTCCCG CGCGATGCTG
GCCTTCAACG ATCCGGAAGA GGCGCTGGCA TGGCTGCGCC AGTGGCACTC GCTACGCATG
CCCGGCTTCC TGCCGGTGCG CGTCACCCAT GACGACCTGA CCTTCTCCAC CGAGCGCCGC
ACCATCCAGC TCGACGTCGA CCGCGTCTAC CGCCAGATCC ACGAGGTCAA CCGTTTCCTG
CAGCCGTCCG TGATCGTGGT GGACTACAGC ATGCCGCGCA TGAACGGCCT CGAGTTCTGC
GCCAAGCTCA AGGACCTGCC CTGCATGACG ATCCTGCTGA CCGGCATGGC CGACGAGAAC
ATCGCCGTGC AGGGCTTCAA CGACGGCCTG ATCGACCGCT ACATCAAGAA GGATCATCCG
GCCATGGCCG AGCGCCTGAG CACGGAGATC GAAGCGCTGC AGATGCGCTA CTTCAGCAAC
CTGTCGAGCA CGCTGCGCGA ACTGCTGTCG CGCCATTCGT TCAGCTTCCT CTCCGATCCG
GCGGTCACCA AGCTCGTGCG GGAGCTGGCC GCGCGCTATC GCTTCATCGA GTACTACCTG
TACCCGCACC CGGCCGGCGT GCTGATGCTG ACCGCCGACG GCCGCGCCAC CCTGATGGTG
ATCGAGACCG GCGCGAGCAT GCTCACGCAC CTGGAGGATG CCGAGGCCTA CGATGCCCCC
GAGGCGCTGC TCAAGGGCCT GCGCGAAAAG CAGATCGTCC CGTTCTTCTG GCCGGGAGAC
GGCATGTACA CCCACGCCTG CGTCGAATGG GAGCAGTACT GCCTGCCCGC CGAGGTCTGC
CAGGGGCGCG AACCGTACTA CTACGCATTG TTCGACATGC CGTCGCATCT GCTGCCGGCG
CAGATCTACA GCTACACCCA ATTTCTTGCC AACTACCGGC AGGATCCGGA CGCGCTGACC
GGCCGCAAAC CGCGCTGA
|
|---|
| Protein sequence | MQQDNALPVY FHPTLTVVVD DSQSFVESLG FQMDPSRAML AFNDPEEALA WLRQWHSLRM
PGFLPVRVTH DDLTFSTERR TIQLDVDRVY RQIHEVNRFL QPSVIVVDYS MPRMNGLEFC
AKLKDLPCMT ILLTGMADEN IAVQGFNDGL IDRYIKKDHP AMAERLSTEI EALQMRYFSN
LSSTLRELLS RHSFSFLSDP AVTKLVRELA ARYRFIEYYL YPHPAGVLML TADGRATLMV
IETGASMLTH LEDAEAYDAP EALLKGLREK QIVPFFWPGD GMYTHACVEW EQYCLPAEVC
QGREPYYYAL FDMPSHLLPA QIYSYTQFLA NYRQDPDALT GRKPR
|
|---|
| |