Gene Rpic_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2973 
Symbol 
ID6287122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3096294 
End bp3097331 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content62% 
IMG OID642626543 
Productresponse regulator receiver protein 
Protein accessionYP_001900528 
Protein GI187930041 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGG ACAGCGCCCT GCCGGTCTAT TTCCACCCTA CCCTGACGGT GGTGGTCGAC 
GACAGCCAAT CGTTCGTGGA AAGCCTCGGG TTCCAGATGG ACCCATCACG TGCGCTGCTG
GCTTTCAATG ATCCGGAAGA GGCGCTGGCG TGGCTGCGCC AGTGGCATTC GCTTCGCATG
CCGGGTTTCC TGCCCGTGCG CGTCACGCAC GATGACCTGA CGTTCTCGAC CGAGCGCCGC
ACGATCCAGC TCGACGTCGA CCGCGTCTAC CGCCAGATCC ACGAGGTCAA CCGCTTCCTC
CAGCCCTCGG TCATCGTGGT GGATTACTCC ATGCCACGCA TGAACGGTCT GGAGTTCTGC
GCCAAGCTCA AAGATCTGCC GTGCATGACG ATCCTGCTCA CCGGCATGGC CGACGAGAAC
ATCGCCGTGC AGGGTTTCAA CGACGGCCTG ATCGACCGCT ACATCAAGAA AGACAATCCG
GCGATGGCCG AGCGGCTCAG CGCGGAAATC GAAGCACTGC AGGTGCGCTA CTTCAGCAAC
CTGTCGAGCA CACTGCGCGA TCTCCTGTCG CGCCACTCGT TCAGCTTCCT GTCAGACCCG
GCGATCACAC GGCTCGTGCG CGATTTGTCT ACGCGCTACC GCTTTATCGA GTACTACCTC
TATCCGCACC CCGCCGGCGT GCTGCTGCTC ACGGCCGATG GGCGGGCGAC GCTCATGGTC
ATCGAGACCA ACGCGAGCAT GCTCACGCAC CTGGAAAACG CCGAGGCCTA CAACGCGCCC
GACGCGCTGC TCAAGGGGCT ACACGACAAG CAGATCGTCC CGTTCTTCTG GCCCGGCGAT
GGGATGTACA CCCCGGCCTG TGTGGAGTGG GAACAATATT GCCTGCCCGC AGAGGTGTGC
CAGGGGCGCG AGCCGTATTA CTACGCGCTG TTCGACATGC CCAGCCATCT GCTGCCGGCA
CAGGTCTACA GCTACGCCCA ATTCCTCACC AACTACAAAC AGGATCCGGA CGCGCTCACC
GGCCGCAAGC CACGCTGA
 
Protein sequence
MQQDSALPVY FHPTLTVVVD DSQSFVESLG FQMDPSRALL AFNDPEEALA WLRQWHSLRM 
PGFLPVRVTH DDLTFSTERR TIQLDVDRVY RQIHEVNRFL QPSVIVVDYS MPRMNGLEFC
AKLKDLPCMT ILLTGMADEN IAVQGFNDGL IDRYIKKDNP AMAERLSAEI EALQVRYFSN
LSSTLRDLLS RHSFSFLSDP AITRLVRDLS TRYRFIEYYL YPHPAGVLLL TADGRATLMV
IETNASMLTH LENAEAYNAP DALLKGLHDK QIVPFFWPGD GMYTPACVEW EQYCLPAEVC
QGREPYYYAL FDMPSHLLPA QVYSYAQFLT NYKQDPDALT GRKPR