| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3514 |
|---|
| Symbol | |
|---|
| ID | 4689443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3729570 |
|---|
| End bp | 3730598 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639836528 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_983732 |
|---|
| Protein GI | 121606403 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.95841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT TTCAATTTTC CTTGACCAAG GCTCCAGCCA TGTCCTTTAC CCTTTATCGC
CGCCCCGGAG GCCTGGTTTT CCTCGATGAT GACCGGGACT ATCTTGAAAT GCTGGGCGAA
GTCATGCCGC CCGACTGGTT CGTGCGCCTG TTTTTGCGGC CCATCGCCTG CATCGAGCTG
CTGCAGCAAG ATTGCCAGCT CCGGGATGCA GACGCCTGGA GCCAGCAGCA AATCGTCAAC
CGCTGGCGTG AAGGCGCCTT GCTGATTCCG CAAATCCTGC AGTACTGGCG CGGCGATGGC
GCGGCCCGGT TTGCGCTTGC GCAGGTCGCC GTGGTGGACT ACGCCATGCC GGCCATGAGC
GGGCTGCGGA TGCTGGGCGA GCTGACCCAA TGGCCGGGTT CGCGCATTTT GCTCACCGGC
CGCGCCGATG AGCAGCTTGC GGTGTCGGCC TTCAACCGGG GGCTGATCAA CCAGTTCATC
CCCAAGCAGT CCCCGGAGCT TCGCCTGCGC CTGATCGGCG CCATCCAGGA TCTGCGCCAC
CAGCCGGACA AGCGCCACCA ACAGATCTGG TACGCCACCC TGTCACCGGC CCAGCATGCG
CTGCTGGGCG ACCCGCTGAT TGGCGAGGCG CTGGAAAACC TCATGCGCCA GCAGGGCTGG
ACAGAACATG TCGTCATCGG CGCGCCGTTT GGCGTGCTCG GGCTGGACGC CCGGGGCAAC
GCCAGCTGGC TGCAGCTGGA GCCGGAGGAA AACCTGCAGG AACTGGCTGA AATAGCCCTG
TCCCAGGGCT GGAATGCAAG CACCGTCGAG GACATCCGCA GCGGCGGCAA GCTCATCGAC
CTGGAGCTGC AGCTGGCGCT GGGCGACAGC CATCAGCCCC AGCCGCGCGA GTCGCTGGTC
ATGCGCGGGG ATGCCCGGCG TCTTTACGCG GCCATTTTCC CCATCAGCGA GTCGTTCAGC
CCGGGCCTGA CGGCCAGTTA CGAGCGGTTT CTGGCCAGCC ATGGCGAAAG GCGCCTGCCC
GAGGATTAG
|
|---|
| Protein sequence | MSHFQFSLTK APAMSFTLYR RPGGLVFLDD DRDYLEMLGE VMPPDWFVRL FLRPIACIEL
LQQDCQLRDA DAWSQQQIVN RWREGALLIP QILQYWRGDG AARFALAQVA VVDYAMPAMS
GLRMLGELTQ WPGSRILLTG RADEQLAVSA FNRGLINQFI PKQSPELRLR LIGAIQDLRH
QPDKRHQQIW YATLSPAQHA LLGDPLIGEA LENLMRQQGW TEHVVIGAPF GVLGLDARGN
ASWLQLEPEE NLQELAEIAL SQGWNASTVE DIRSGGKLID LELQLALGDS HQPQPRESLV
MRGDARRLYA AIFPISESFS PGLTASYERF LASHGERRLP ED
|
|---|
| |