23 homologs were found in PanDaTox collection
for query gene RPD_2373 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_2373  regulatory protein, LuxR  100 
 
 		 202 aa  395  1e-109  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0971742  normal  1 
 
 
-
 
NC_011004  Rpal_2543  transcriptional regulator, LuxR family  64.04 
 
 		 201 aa  237  1e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2405  LuxR family transcriptional regulator  25.54 
 
 		 402 aa  45.1  0.0006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  hitchhiker  0.00445538 
 
 
-
 
NC_010511  M446_0039  LuxR family transcriptional regulator  26.5 
 
 		 369 aa  44.7  0.001  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.0051974 
 
 
-
 
NC_009832  Spro_0618  LuxR family transcriptional regulator  38.1 
 
 		 215 aa  43.9  0.001  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  43.64 
 
 		 209 aa  44.3  0.001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  44.64 
 
 		 212 aa  43.9  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  41.82 
 
 		 215 aa  43.9  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_010087  Bmul_5990  LuxR family transcriptional regulator  47.17 
 
 		 367 aa  43.9  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.0414123 
 
 
-
 
NC_013595  Sros_3938  response regulator receiver protein  32.62 
 
 		 295 aa  43.5  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.464437  normal  0.0101023 
 
 
-
 
NC_008544  Bcen2424_6030  LuxR family transcriptional regulator  53.19 
 
 		 363 aa  43.1  0.003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.795046  normal  0.297975 
 
 
-
 
NC_008062  Bcen_5666  LuxR family transcriptional regulator  53.19 
 
 		 363 aa  43.1  0.003  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.547238  n/a   
 
 
-
 
NC_013216  Dtox_0621  ATP-dependent transcriptional regulator, MalT- like, LuxR family  42.62 
 
 		 824 aa  42.7  0.003  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.000000506024  unclonable  0.000000000328283 
 
 
-
 
NC_008043  TM1040_3227  LuxR family transcriptional regulator  42.86 
 
 		 545 aa  43.1  0.003  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4986  two component LuxR family transcriptional regulator  38.46 
 
 		 237 aa  43.1  0.003  Cupriavidus metallidurans CH34  Bacteria  normal  0.170484  normal  0.313407 
 
 
-
 
NC_010512  Bcenmc03_6520  LuxR family transcriptional regulator  53.19 
 
 		 363 aa  43.1  0.003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.514397 
 
 
-
 
NC_007333  Tfu_2959  LuxR response regulator receiver  47.17 
 
 		 225 aa  42.7  0.004  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  40.35 
 
 		 214 aa  42.7  0.004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_3356  regulatory protein, LuxR  26.04 
 
 		 373 aa  42.4  0.005  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.734282 
 
 
-
 
NC_007912  Sde_0062  response regulator receiver domain-containing protein  41.54 
 
 		 369 aa  42  0.006  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000342742  normal  1 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  42.11 
 
 		 227 aa  41.6  0.008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009719  Plav_0160  response regulator receiver protein  39.62 
 
 		 279 aa  41.6  0.009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A0027  LuxR family transcriptional regulator  33.33 
 
 		 381 aa  41.2  0.01  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
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