| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3356 |
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| Symbol | |
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| ID | 5199493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3684452 |
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| End bp | 3685573 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582902 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001263840 |
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| Protein GI | 148556258 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.734282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACC CGACGCCCGA CGAATATCCC GACATGCCCG GCGTGCTCGC CGCGCTGTTC
GCCAGCCTGC TCGACGAGGA GCCGTGGTCG GCCTTCCTCG AACGGCTCGG CGAGGCCTCC
GGCGCGACCT GGGCCACGCT GATCCTCACC CCGCGCCAGG CCGACCAGCC CGGCATGATC
CTGACCCCCA ACGCCGATCC CGGCGTCGGC GCCGACTATA ACAGCCGCCT GTTCGCCGAG
GACCCGTTCG TCGGCCTGCC CGAGGGCAAG GTCGCGCGCT TCCGCGATTT CGTGCCGGCC
ACCACGCTCG ACCGCAAGAC CGCCTTCCGC GCCTTCCTCG AACAGACCAG CGACGAGATT
CTCGGCGTCG ACATCGGCGA GGCGAGCCGG CTCGAGATGC GGCTGCGGCT GACCCGCGCC
GCCGACCGGC CGCGCTTCGA ACCGGCCGAC CGCCGCCGGC TGGAGACGCT GGTCCCCCAT
CTCCGCATCG CGCTGGCGCT GTTCGAGCGG CTGGCGGCGG GCGAGACCGA GCAGCGCATC
TATGCCGGCG CGGTCGCCCA GATGGCGGTC GGCGTGATCA TCCTCGACCG GCGCGGCAAG
GTGCTGCGCC TCAATCCGCC GGCCTCGACC ATCCTGGCCG AGCGCGACGG GATCGCGCTG
CGCGGCGACG CACTGACGTT CGACGATGCC GAGATCGGCC GCCAGCTCCA GGCGCGCCTC
GCCCGCAGCG ACGAGAACGG CCCGCTGACG CTGCGGATCG AACGGCCCTC GGGTACCGGC
GACCTGCTGC TGGTGGTCGG CCAGGCGCCG GCCCCCGAAT TCGTGTCGGC GGGCGGCGGC
CCGGCGGCGG TGCTGTTCCT GACCGATCCG ACCCATGGGC CGCGCATCTC GGCCGAGGCG
ATCCGCGACC TGCTCGGCCT GACCCAGGGC GAGGCGGCGG TGGCCGCGCA TCTCGCCGAG
GGGCTGGCGC CGGCCGAGGT GGCGGCCCGG CTCGGCATTT CCGCCAACAC CGTGCGCGCG
CACCTGCGCT CGATCTTCGG CAAGACCGGG GTCAAGCGGC AGAGCCAGCT CGTCCAGCTC
GTCCATCAGA GCCTGCCCAG CCTGTCGCGC CCCGCGCCCT GA
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| Protein sequence | MPDPTPDEYP DMPGVLAALF ASLLDEEPWS AFLERLGEAS GATWATLILT PRQADQPGMI
LTPNADPGVG ADYNSRLFAE DPFVGLPEGK VARFRDFVPA TTLDRKTAFR AFLEQTSDEI
LGVDIGEASR LEMRLRLTRA ADRPRFEPAD RRRLETLVPH LRIALALFER LAAGETEQRI
YAGAVAQMAV GVIILDRRGK VLRLNPPAST ILAERDGIAL RGDALTFDDA EIGRQLQARL
ARSDENGPLT LRIERPSGTG DLLLVVGQAP APEFVSAGGG PAAVLFLTDP THGPRISAEA
IRDLLGLTQG EAAVAAHLAE GLAPAEVAAR LGISANTVRA HLRSIFGKTG VKRQSQLVQL
VHQSLPSLSR PAP
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