Gene Bcen2424_6030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6030 
Symbol 
ID4454236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp179980 
End bp181071 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content69% 
IMG OID639698090 
ProductLuxR family transcriptional regulator 
Protein accessionYP_839655 
Protein GI116686408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.795046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.297975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGA ACGGATTGAT TCCCTCGGCA TGGATCGATG ACGTCTACGC CGCGGCACTG 
GGCGATCAAC GATGGGAAGC GGTGCTGGAC GGGCTGCGTC TGACGGTCGG CACGCGCATG
GCCACACTGC TGTCGTTCGA CGACGCGGCG CGGATGCCGG CAATCGAGCG GGCAGCCGGC
GACGATCCGT CATGGGTCGC CGCATGCCAC CACCGCTACA ACACCGAGTT CTACCTGTAC
GACCCGGTCG TACCGGTTGC CGCCGACTGG CCGGCAGGGC GCTGGTTCGA AGACGTCAAG
CACCTGTCGG TGCGGCAGCG TACACATGGC GTGTTCTATC GGGAATTCAT GCATCCGTTC
GGGCTCGGCG GCATCTCGGG CCTGTACATC CATCGCGGCG AGGGCGCCGG CGCTTTCCTC
AGCGTACAGA GCGGCCCGGA ATCGCACGGG TTGTCCGACG CGCAGCGCCG CACCATCGAA
ATCATGGGCG GCCACATCAG TCGCGCGCTG CGCATCCATG CGCGCATCGG CGAACTCGAA
GCACGCGTGG CCGCCGCGGA GTCGGCGCTC GATGCGGTGC CGGTGCCCGT GTTCCTGCTC
GGCCCGCGGC GCGAACTGCG CTATACGAAC CGCGCGGCCG ATCAGCTGAT CGCCGCCGAA
CCGGCGCTGC GGATCGTCAA CGGCCGTTTC GCGCCGGAAG GCTGCGTCGA TGACACGCAA
TGGCGGTATG CGTTCGCGCG CGGCGGGCTA TTGCTGCGGC GTACGACGGG CGAGCCGCTG
CCGCTTGCGC TGATCCCCGT TCCCGAACAG TCGCGCCTCG CGCGCGAACG GCCCGGCGTC
GCGGCGCTGA TGACGGCCGC GGACCTGCGT GCGCCGTCGG CGCGCGCGCA ACGCTTGCGG
GTGTTCTACG GGTTGTCGTC GGCGGAAGCC GAGCTGGCCG TGCTGCTGTG CTGCGACGGA
CGCTCGCCGC AGGAGTGCGC GGCGCTGCGC GGCGTGTCGA TCGGCACGGT CCGCGCGCAG
ATCAAGTCGA TCTACACGAA GACGGACGTG GCGCGCGCCG CGCAACTGAC GTCGCTGGTC
ATGCAGACCT GA
 
Protein sequence
MQMNGLIPSA WIDDVYAAAL GDQRWEAVLD GLRLTVGTRM ATLLSFDDAA RMPAIERAAG 
DDPSWVAACH HRYNTEFYLY DPVVPVAADW PAGRWFEDVK HLSVRQRTHG VFYREFMHPF
GLGGISGLYI HRGEGAGAFL SVQSGPESHG LSDAQRRTIE IMGGHISRAL RIHARIGELE
ARVAAAESAL DAVPVPVFLL GPRRELRYTN RAADQLIAAE PALRIVNGRF APEGCVDDTQ
WRYAFARGGL LLRRTTGEPL PLALIPVPEQ SRLARERPGV AALMTAADLR APSARAQRLR
VFYGLSSAEA ELAVLLCCDG RSPQECAALR GVSIGTVRAQ IKSIYTKTDV ARAAQLTSLV
MQT