| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6520 |
|---|
| Symbol | |
|---|
| ID | 6125443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 576532 |
|---|
| End bp | 577623 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641647533 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001774130 |
|---|
| Protein GI | 170735016 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.514397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATGA ACGGATTGAT TCCCTCGGCA TGGGTCGATG ACGTCTACGC CGCGGCACTG
GGCGATCAAC GATGGGAAGC GGTGCTGGAC GGGCTGCGTC TGACGGTCGG CACGCGCATG
GCCACACTGC TGTCGTTCGA CGACGCGGCG CGGATGCCGG CAATCGAGCG GGCAGCCGGC
GACGATCCGT CATGGGTCGC CGCATGCCAC CACCGCTACA ACACCGAGTT CTACCTGTAC
GACCCGGTCG TGCCGGTTGC CGCCGACTGG CCGGCCGGGC GCTGGTTCGA GGACGTCAAG
CACCTGTCGG TGCGGCAGCG TACACATGGC GTGTTCTATC GGGAATTCAT GCATCCGTTC
GGGCTCGGCG GCATCTCGGG CCTGTACATC CATCGCGGCG AGGGCGCCGG CGCTTTCCTC
AGCGTACAGA GCGGCCCGGA ATCGCACGGG TTGTCCGACG CGCAGCGCCG CACCATCGAA
ATCATGGGCG GCCACATCAG TCGCGCGCTG CGCATCCATG CGCGGATCGG CGAACTCGAA
GCGCGCGTGG CCGCCGCGGA GTCGGCGCTC GATGCGGTGC CGGTGCCCGT GTTCCTGCTC
GGCCCGCGGC GCGAACTGCG CTATACGAAC CGCGCGGCCG ATCAGCTGAT CGCCGCCGAA
CCGGCGCTGC GGATCGTCAA CGGCCGTTTC GCGCCGGAAG GCTGCGTCGA TGACACGCAA
TGGCGGTACG CGTTCGCGCG CGGCGGGCTA TTGCTGCGGC GTACGACGGG CGAGCCGCTG
CCGCTTGCGC TGATCCCCGT TCCCGAACAG TCGCGCCTCG CGCGCGAACG GCCTGGCGTC
GCGGCGCTGA TGACGGCCGC GGACCTGCGT GCGCCGTCGG CGCGCGCGCA ACGCTTGCGG
GTGTTCTACG GGTTGTCGTC GGCGGAAGCC GAGCTGGCCG TGCTGCTGTG CTGCGACGGA
CGCTCGCCGC AGGAGTGCGC GGCGCTGCGC GGCGTGTCGA TCGGCACGGT CCGCGCGCAG
ATCAAGTCGA TCTACACGAA GACGGACGTG GCGCGCGCCG CGCAACTGAC GTCGCTGGTC
ATGCAGACCT GA
|
|---|
| Protein sequence | MQMNGLIPSA WVDDVYAAAL GDQRWEAVLD GLRLTVGTRM ATLLSFDDAA RMPAIERAAG
DDPSWVAACH HRYNTEFYLY DPVVPVAADW PAGRWFEDVK HLSVRQRTHG VFYREFMHPF
GLGGISGLYI HRGEGAGAFL SVQSGPESHG LSDAQRRTIE IMGGHISRAL RIHARIGELE
ARVAAAESAL DAVPVPVFLL GPRRELRYTN RAADQLIAAE PALRIVNGRF APEGCVDDTQ
WRYAFARGGL LLRRTTGEPL PLALIPVPEQ SRLARERPGV AALMTAADLR APSARAQRLR
VFYGLSSAEA ELAVLLCCDG RSPQECAALR GVSIGTVRAQ IKSIYTKTDV ARAAQLTSLV
MQT
|
|---|
| |