| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0062 |
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| Symbol | |
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| ID | 3967146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 75944 |
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| End bp | 77053 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919121 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_525538 |
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| Protein GI | 90019711 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000342742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA CCGATGTTAT TGAGCAAATT TACGCCACTA TTCGACAGCC GGAATTATGG
TCTGACACTC TCTCCAACCT TGCCAAAGTG CTTAATTCTA GCCATGCCTT TATTGCAGCC
CGCCACTCTA CTCAGGAACA GCCCTTCGCT TTTATAGAAC ACGGCTTTAG TGACGGCCAT
TTCCAAACCT ATCAAGAGCA CTTTTATAAA GTAGATGTAT GGACACAGGC ACTGGCTAAT
CACACTCCCA ATCGCTTTCA TGCAAGCCAT GCTGTTTACG ACGATAAAGC TTTTAAACAA
TCAGAAATTT ATAATGACTT CGCTCGCCCC GCGGATATCC GCCACTCCAT TGGCTGCCTG
TTACTTTCAG CACAACAACC AGTGATGACC GAGCTGGCAT TTATGCGTGG CGAAGGCGAT
CAACAGTTTT CTGCCGGCCA AGCGGAATTA GCCTCTAGCT TTTTAAAACA TATTCAGCAA
AGTTTACTTA TTGGGCAGCA ATTACAGGTC GCAACACAAG CAGACAACTC ATTGCACACT
TTTTTAAACA CAGTAACTGA TGCCACGCTT ATCTGCTCAA CTAAATTTGA GTTGCACTAC
AACAACAACG CCGCAGAACA ACTGCTCCGC CAATCTCGGC TTTTACACGT AGGTTTGGAT
AAAAAGTTAC GCTTTGAAAA TTTGTCCACT CACTCTCAAG TACAACAATT AGTTGAACAA
TTAGTGTGGT CAGAAAGAAA TTCGCTCGAT ACTAGCCTGC TCACGCAGGC AGGCGATGTG
CGTTACAGGA TAAACATCCA ACCCTGGTTT GAAGAAATTT CCACACCTTG GGGCAAGCAT
AAAATTCCTG CGCTAATTAT TACTGTTAAA CCTATTGCCA CTCGCGTGGA AATATCTGCT
GAAATAATAC GTGAGCTATT TAATTTAACA ATTGCCGAAG CCGAAGTGTG TGCAGCCTTA
TGCTCTGGAT TAACAACGCA AGAAATCGCC AAGCAGCGGA ATGCAAGTAT AGGCACCGTT
AGACAACAAA TAAAAACCTG CTTAAGCAAA ACGCAAACAA ACAGCCAAAG CCAGTTGGTT
GCCAAGCTGA TAACAACGCA AGTTATTTAG
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| Protein sequence | MKDTDVIEQI YATIRQPELW SDTLSNLAKV LNSSHAFIAA RHSTQEQPFA FIEHGFSDGH
FQTYQEHFYK VDVWTQALAN HTPNRFHASH AVYDDKAFKQ SEIYNDFARP ADIRHSIGCL
LLSAQQPVMT ELAFMRGEGD QQFSAGQAEL ASSFLKHIQQ SLLIGQQLQV ATQADNSLHT
FLNTVTDATL ICSTKFELHY NNNAAEQLLR QSRLLHVGLD KKLRFENLST HSQVQQLVEQ
LVWSERNSLD TSLLTQAGDV RYRINIQPWF EEISTPWGKH KIPALIITVK PIATRVEISA
EIIRELFNLT IAEAEVCAAL CSGLTTQEIA KQRNASIGTV RQQIKTCLSK TQTNSQSQLV
AKLITTQVI
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