Gene Rpal_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2543 
Symbol 
ID6410205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp2748358 
End bp2748963 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content68% 
IMG OID642712421 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_001991531 
Protein GI192290926 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGAGA CGCTCGACGC GGTTTCGGTC CACACCGTGG TGCTCGGCGG CGATGGCCGC 
TGCATCAGCA TCTCGCCCTG CGCCGAGACG CTGTTGTCGA ACGGCTCGCC GCTCACCGTG 
CAGATGGAGC GGCTGCGCCG CAGCAAGACC TCGAGCGCGG TTGCCGAATG TCCGCGGCTC 
GGAAGTGCGG TCGACATCGA CCTTGATCTG CAGCCGTGCA TCGACTGCGT CACGCGCCGC 
AACGCCAGCG CGCCGTGCCT CGGCAGTTGC GCGATCTCGA TCTCCGGCCC AAACGATGCT 
GCCATCCATC TGCGGCTGAC GTCGATCCCT TTGGCAGACC AGCAGGCGCT GACCGGTGCG 
GCCGCGATGG CGGTGATCCG GCCGCTGACG GTGCAGCATT CGGCAGAGTT GCTCCCCGAC 
ATCGCCGTGC TGCTGACTGC GGCCGAGCGT GAGGTCGCGA CCGAACTCCT CAGCGGCCGG 
CGGCCTGCCG AGATCGCACA GCTTCGCGGC GTCTCGATCG GCACGATCCG GTCGCAGATC 
AAGCGCATCT ACGCCAAGCT CGGCGTCTCC GGCCTAGTCG AGTTCATCGC CCGCGCACGG 
CGGTGA
 
Protein sequence
MVETLDAVSV HTVVLGGDGR CISISPCAET LLSNGSPLTV QMERLRRSKT SSAVAECPRL 
GSAVDIDLDL QPCIDCVTRR NASAPCLGSC AISISGPNDA AIHLRLTSIP LADQQALTGA 
AAMAVIRPLT VQHSAELLPD IAVLLTAAER EVATELLSGR RPAEIAQLRG VSIGTIRSQI 
KRIYAKLGVS GLVEFIARAR R