More than 300 homologs were found in PanDaTox collection
for query gene Ping_2509 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_2509  ABC sugar transporter inner membrane binding protein  100 
 
 
342 aa  683    Psychromonas ingrahamii 37  Bacteria  normal  normal  0.492226 
 
 
-
 
NC_011988  Avi_5709  ABC transporter membrane spanning protein (sugar)  43.8 
 
 
316 aa  200  3e-50  Agrobacterium vitis S4  Bacteria  normal  0.673224  n/a   
 
 
-
 
NC_009654  Mmwyl1_2714  binding-protein-dependent transport systems inner membrane component  41 
 
 
293 aa  192  9e-48  Marinomonas sp. MWYL1  Bacteria  normal  0.548655  normal 
 
 
-
 
NC_008048  Sala_0750  binding-protein-dependent transport systems inner membrane component  39.5 
 
 
290 aa  190  2e-47  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3454  binding-protein-dependent transport systems inner membrane component  41.92 
 
 
299 aa  181  1e-44  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.625202  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  43.17 
 
 
306 aa  177  3e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_013745  Htur_4489  binding-protein-dependent transport systems inner membrane component  40.81 
 
 
308 aa  165  1.0000000000000001e-39  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.283214  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  37.61 
 
 
299 aa  165  1.0000000000000001e-39  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29440  permease component of ABC-type sugar transporter  38.77 
 
 
318 aa  161  2e-38  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  39.92 
 
 
320 aa  160  2e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
307 aa  160  4e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
296 aa  158  1e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
309 aa  157  4e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  35.86 
 
 
287 aa  155  1e-36  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
308 aa  154  1e-36  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  38.39 
 
 
294 aa  155  1e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
311 aa  155  1e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
314 aa  155  1e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
317 aa  153  4e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  36.09 
 
 
305 aa  153  4e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
309 aa  153  5e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  33.62 
 
 
310 aa  151  1e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
295 aa  151  2e-35  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0964  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
313 aa  150  3e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.194798  decreased coverage  0.00518822 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.33 
 
 
292 aa  150  4e-35  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  36.36 
 
 
317 aa  150  4e-35  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
310 aa  149  9e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
306 aa  148  1.0000000000000001e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  36.25 
 
 
275 aa  147  2.0000000000000003e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  35.68 
 
 
310 aa  147  3e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2875  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
318 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal  0.0272583 
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  35.68 
 
 
310 aa  147  3e-34  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  35.24 
 
 
317 aa  147  3e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  35.24 
 
 
310 aa  146  4.0000000000000006e-34  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  35.17 
 
 
310 aa  146  6e-34  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  35.24 
 
 
310 aa  145  7.0000000000000006e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
312 aa  145  7.0000000000000006e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  35.24 
 
 
310 aa  145  7.0000000000000006e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  35.24 
 
 
310 aa  145  1e-33  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4149  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
296 aa  145  1e-33  Opitutus terrae PB90-1  Bacteria  decreased coverage  0.00598191  normal  0.10352 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
299 aa  145  1e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  27.68 
 
 
420 aa  145  1e-33  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
305 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
298 aa  145  1e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  35.56 
 
 
289 aa  144  2e-33  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  34.8 
 
 
310 aa  144  3e-33  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  34.8 
 
 
310 aa  144  3e-33  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
312 aa  144  3e-33  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  29.03 
 
 
307 aa  143  3e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  29.03 
 
 
307 aa  143  3e-33  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013947  Snas_0204  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
299 aa  143  5e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.497209  normal  0.169553 
 
 
-
 
NC_013526  Tter_2573  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
309 aa  143  5e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  25.69 
 
 
420 aa  142  6e-33  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
313 aa  142  6e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  32.77 
 
 
293 aa  142  8e-33  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3983  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
302 aa  142  9e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.159905  normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
312 aa  142  9.999999999999999e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
294 aa  141  1.9999999999999998e-32  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0647  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
325 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
290 aa  141  1.9999999999999998e-32  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_011370  Rleg2_6091  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
292 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
316 aa  140  3e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  33.99 
 
 
309 aa  140  3.9999999999999997e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
310 aa  140  3.9999999999999997e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013525  Tter_0428  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
310 aa  139  4.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_0563  binding-protein dependent transport system inner membrane protein  37.25 
 
 
294 aa  139  4.999999999999999e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  0.22835  normal  0.0558608 
 
 
-
 
NC_009654  Mmwyl1_0231  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
359 aa  140  4.999999999999999e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  36.24 
 
 
311 aa  139  4.999999999999999e-32  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
296 aa  139  4.999999999999999e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
313 aa  139  8.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
321 aa  139  8.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
283 aa  139  8.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
296 aa  139  8.999999999999999e-32  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
292 aa  139  8.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
296 aa  138  1e-31  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
319 aa  137  2e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
307 aa  138  2e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  32.91 
 
 
305 aa  137  2e-31  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  33.19 
 
 
310 aa  137  2e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
293 aa  136  4e-31  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
293 aa  137  4e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  30.25 
 
 
294 aa  136  5e-31  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
296 aa  136  6.0000000000000005e-31  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
415 aa  135  8e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  33.19 
 
 
321 aa  135  8e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
319 aa  135  9e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  30.4 
 
 
314 aa  135  9.999999999999999e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
301 aa  135  9.999999999999999e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
305 aa  135  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0941  binding-protein-dependent transport systems inner membrane component  32.9 
 
 
313 aa  135  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.737632 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
315 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  32.59 
 
 
300 aa  134  1.9999999999999998e-30  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3122  binding-protein-dependent transport systems inner membrane component  31.49 
 
 
305 aa  134  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.99861  hitchhiker  0.000381845 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
296 aa  134  1.9999999999999998e-30  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
417 aa  134  3e-30  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
309 aa  134  3e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
292 aa  134  3e-30  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  34.2 
 
 
353 aa  134  3e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
299 aa  134  3e-30  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
296 aa  133  3.9999999999999996e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
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