Gene Ping_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2509 
Symbol 
ID4626598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3065868 
End bp3066896 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content40% 
IMG OID639797635 
ProductABC sugar transporter inner membrane binding protein 
Protein accessionYP_943829 
Protein GI119946149 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.492226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATTT TTGGCCTTTT TTTACTCTAT CCATTTGCTA AAGGTATTTG GATCAGTTTG 
CATGAGTGGA ATTTACTTGA AGTTGCATTT AATCCAGATG CAAAAGAGTT TGTCGGTCTA
GATAATTATA TCAAGCTTCT CTTTCCTCGC AGTTGGGATT TTGAATGGGA TCAATTACTC
CTATTTCGTG TTTTTTTAGG CGCAGGTCTG ACTTTTCTTG TTTGGAATGC AAATAAGAAA
AATAAGATGA CTCCCTTACT CTGGGGATTA AGTATTGCTG CACTCTTAAT CATTGTTTAC
TTGATGGGCT GGGGACCTGA AAATGGAGGA CGTATTGGAG ATCGTCGTTT TTGGACCTCT
GTCGGCAATA CAGTTAAATT TGTATTGTAT GTTGGGCCAC TTATTACGGT ACTGGCTTTA
GTCCTGGCCA TTCAACTTAA TAAACCAGGT AAAACCACCG CGATTTTACG TACGATTTTC
TTCTCAACTC AAGTGCTTTC AGTCACGGTA GTGACTTTGG TCTGGCAGCT AATGTATAGC
CCCCAAAATG GCTTTATAGC CAATATTTTT GAAATTTTTG GCATGGACTC TATAGCGTGG
TTAACCAATC AAAATTTAGC AATGCCCGCA ATTGTGATTG CAACCGTCTG GTGGTCATTA
GGTTTTGCTT TAGTGGTATT TTTATCTGGT TTACAGAGTA TTCCAAACGA TCGTCTTGAA
GCGGCTCGTC TTGATGGAGC GAAAGGTTGG GGAATTATTT GGTACGTCAT TGTACCGTCT
ATTAAAGGCA CAATCACTTT TGTATTGATT ATGCAGCTCG TCCTGCACTT CCAAGTCTTT
GGTCAGTCAC ACCTGATGAC CAATGGCGGC CCTGGAGATA GCACTCAGGT TCTCGTACGT
TATATCTATC AGACTGCATT TCGAGATTCG AATGTGGGTT ATGCATCGGC AATGGCCATT
ATGCTGTTTA TTATTATGAT GACCTTCAGC TTAATTCAGG CAAAGGTAAG TAAAAGAGGA
GAGCAGTAA
 
Protein sequence
MVIFGLFLLY PFAKGIWISL HEWNLLEVAF NPDAKEFVGL DNYIKLLFPR SWDFEWDQLL 
LFRVFLGAGL TFLVWNANKK NKMTPLLWGL SIAALLIIVY LMGWGPENGG RIGDRRFWTS
VGNTVKFVLY VGPLITVLAL VLAIQLNKPG KTTAILRTIF FSTQVLSVTV VTLVWQLMYS
PQNGFIANIF EIFGMDSIAW LTNQNLAMPA IVIATVWWSL GFALVVFLSG LQSIPNDRLE
AARLDGAKGW GIIWYVIVPS IKGTITFVLI MQLVLHFQVF GQSHLMTNGG PGDSTQVLVR
YIYQTAFRDS NVGYASAMAI MLFIIMMTFS LIQAKVSKRG EQ