57 homologs were found in PanDaTox collection
for query gene Mpal_1137 on replicon NC_011832
Organism: Methanosphaerula palustris E1-9c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011832  Mpal_1135  2-hydroxyglutaryl-CoA dehydratase D-component  83.4 
 
 		 494 aa  878    Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  0.207631 
 
 
-
 
NC_011832  Mpal_1137  2-hydroxyglutaryl-CoA dehydratase D-component  100 
 
 		 494 aa  1029    Methanosphaerula palustris E1-9c  Archaea  normal  0.417243  normal  1 
 
 
-
 
NC_011832  Mpal_1146  2-hydroxyglutaryl-CoA dehydratase D-component  83.13 
 
 		 501 aa  878    Methanosphaerula palustris E1-9c  Archaea  normal  0.114062  normal  1 
 
 
-
 
NC_009483  Gura_3878  2-hydroxyglutaryl-CoA dehydratase, D-component  40 
 
 		 472 aa  373  1e-102  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_1311  2-hydroxyglutaryl-CoA dehydratase D-component  26.64 
 
 		 388 aa  70.1  0.00000000009  Methanosphaerula palustris E1-9c  Archaea  normal  0.522959  normal  1 
 
 
-
 
NC_011661  Dtur_1746  2-hydroxyglutaryl-CoA dehydratase D-component  25.45 
 
 		 408 aa  69.3  0.0000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_3161  2-hydroxyglutaryl-CoA dehydratase, D-component  25.95 
 
 		 382 aa  69.3  0.0000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009802  CCC13826_1134  UDP-MurNac-pentapeptide presynthetase  27.18 
 
 		 385 aa  69.3  0.0000000002  Campylobacter concisus 13826  Bacteria  normal  0.207036  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  27.84 
 
 		 373 aa  67.8  0.0000000004  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  27.86 
 
 		 373 aa  65.9  0.000000001  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  28.24 
 
 		 373 aa  66.6  0.000000001  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_013165  Shel_25330  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  26.97 
 
 		 390 aa  66.2  0.000000001  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.8257 
 
 
-
 
NC_008554  Sfum_3256  2-hydroxyglutaryl-CoA dehydratase, D-component  26.82 
 
 		 423 aa  63.9  0.000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_25470  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  25.68 
 
 		 425 aa  63.9  0.000000007  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  26.37 
 
 		 373 aa  63.5  0.000000009  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_009715  CCV52592_0873  2-hydroxyglutaryl-CoA dehydratase, D-component  25.52 
 
 		 385 aa  63.2  0.00000001  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  27.27 
 
 		 373 aa  61.6  0.00000003  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  28.67 
 
 		 373 aa  60.5  0.00000007  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
-
 
NC_013385  Adeg_1707  2-hydroxyglutaryl-CoA dehydratase D-component  24.91 
 
 		 415 aa  60.1  0.00000008  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_1685  2-hydroxyglutaryl-CoA dehydratase D-component  23.59 
 
 		 424 aa  59.7  0.0000001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000455282  n/a   
 
 
-
 
NC_008346  Swol_0412  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  23.79 
 
 		 424 aa  59.7  0.0000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3912  2-hydroxyglutaryl-CoA dehydratase D-component  25.98 
 
 		 384 aa  58.5  0.0000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_0607  2-hydroxyglutaryl-CoA dehydratase D-component  27.27 
 
 		 373 aa  58.2  0.0000003  Methanococcus maripaludis C6  Archaea  normal  0.422107  n/a   
 
 
-
 
NC_010468  EcolC_3728  2-hydroxyglutaryl-CoA dehydratase D-component  27.24 
 
 		 383 aa  58.5  0.0000003  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_1418  2-hydroxyglutaryl-CoA dehydratase, D-component  25.75 
 
 		 436 aa  57.8  0.0000004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00133287  normal  0.906732 
 
 
-
 
NC_013216  Dtox_0119  2-hydroxyglutaryl-CoA dehydratase D-component  24.4 
 
 		 424 aa  56.2  0.000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000350126  normal  0.0170821 
 
 
-
 
NC_007644  Moth_1006  2-hydroxyglutaryl-CoA dehydratase, D-component  28.57 
 
 		 421 aa  55.5  0.000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0695891  hitchhiker  0.000177823 
 
 
-
 
NC_002967  TDE0389  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  25.5 
 
 		 412 aa  55.5  0.000002  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  27.09 
 
 		 372 aa  54.7  0.000004  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_010498  EcSMS35_4882  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  26.55 
 
 		 383 aa  53.1  0.00001  Escherichia coli SMS-3-5  Bacteria  normal  0.30993  normal  0.992487 
 
 
-
 
NC_002939  GSU2519  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  23.84 
 
 		 387 aa  51.6  0.00003  Geobacter sulfurreducens PCA  Bacteria  normal  0.321633  n/a   
 
 
-
 
NC_010320  Teth514_1899  2-hydroxyglutaryl-CoA dehydratase, D-component  20.79 
 
 		 416 aa  50.8  0.00005  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1446  2-hydroxyglutaryl-CoA dehydratase, D-component  23.93 
 
 		 381 aa  50.8  0.00006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.629308  normal  0.054659 
 
 
-
 
CP001637  EcDH1_3660  2-hydroxyglutaryl-CoA dehydratase D-component  26.18 
 
 		 383 aa  50.4  0.00007  Escherichia coli DH1  Bacteria  normal  0.814301  n/a   
 
 
-
 
NC_012892  B21_04167  hypothetical protein  26.18 
 
 		 383 aa  50.4  0.00007  Escherichia coli BL21  Bacteria  normal  0.0394396  n/a   
 
 
-
 
CP001509  ECD_04204  predicted 2-hydroxyglutaryl-CoA dehydratase  26.18 
 
 		 383 aa  50.4  0.00007  Escherichia coli BL21(DE3)  Bacteria  normal  0.0605066  n/a   
 
 
-
 
NC_009800  EcHS_A4563  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  26.81 
 
 		 383 aa  50.4  0.00007  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1413  2-hydroxyglutaryl-CoA dehydratase D-component  24.65 
 
 		 415 aa  50.4  0.00007  Geobacter bemidjiensis Bem  Bacteria  normal  0.657921  n/a   
 
 
-
 
NC_009801  EcE24377A_4937  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  25.45 
 
 		 383 aa  50.4  0.00007  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_1927  2-hydroxyglutaryl-CoA dehydratase D-component  27.1 
 
 		 425 aa  50.4  0.00008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.756388  n/a   
 
 
-
 
NC_011883  Ddes_0545  2-hydroxyglutaryl-CoA dehydratase D-component  24.37 
 
 		 379 aa  50.1  0.00009  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  24.83 
 
 		 401 aa  50.1  0.0001  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_011353  ECH74115_5849  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  25.45 
 
 		 383 aa  49.7  0.0001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.981774 
 
 
-
 
NC_010718  Nther_1771  2-hydroxyglutaryl-CoA dehydratase D-component  25.77 
 
 		 419 aa  48.9  0.0002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.433973 
 
 
-
 
NC_011769  DvMF_0986  2-hydroxyglutaryl-CoA dehydratase D-component  24.24 
 
 		 379 aa  48.9  0.0002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.345407 
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  21.04 
 
 		 426 aa  48.9  0.0002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_0091  2-hydroxyglutaryl-CoA dehydratase D-component  25.28 
 
 		 429 aa  48.1  0.0003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3453  2-hydroxyglutaryl-CoA dehydratase D-component  19.01 
 
 		 409 aa  48.5  0.0003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1690  2-hydroxyglutaryl-CoA dehydratase D-component  25 
 
 		 424 aa  48.1  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  0.531982  normal  0.740952 
 
 
-
 
NC_012918  GM21_2867  Benzoyl-CoA reductase  23.13 
 
 		 415 aa  47.8  0.0004  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013165  Shel_26180  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  22.92 
 
 		 384 aa  48.1  0.0004  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  27.14 
 
 		 426 aa  48.1  0.0004  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_0199  2-hydroxyglutaryl-CoA dehydratase D-component  23.02 
 
 		 416 aa  46.6  0.001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000602439  n/a   
 
 
-
 
NC_008751  Dvul_0706  2-hydroxyglutaryl-CoA dehydratase, D-component  23.51 
 
 		 380 aa  46.6  0.001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.255737  normal  0.505258 
 
 
-
 
NC_009943  Dole_0891  2-hydroxyglutaryl-CoA dehydratase D-component  25.2 
 
 		 373 aa  45.1  0.003  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0828  2-hydroxyglutaryl-CoA dehydratase D-component  21.8 
 
 		 393 aa  44.7  0.004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.0000331904 
 
 
-
 
NC_014150  Bmur_0617  2-hydroxyglutaryl-CoA dehydratase D-component  22.75 
 
 		 384 aa  44.7  0.004  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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