| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4882 |
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| Symbol | |
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| ID | 6145977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4997804 |
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| End bp | 4998955 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619686 |
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| Product | putative 2-hydroxyglutaryl-CoA dehydratase, D-component |
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| Protein accession | YP_001746793 |
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| Protein GI | 170680225 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.30993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.992487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTTG TCACCGATCT ACCCGCTATT TTCGATCAGT TCTCTGAAGC TCGCCAGAAA
GGCTTTCTCA CCGTCATGGA TCTCAAGGAG CGCGGCATTC CGCTGGTTGG CACCTACTGC
ACCTTTATGC CGCAAGAGAT CCCGATGGCA GCCGGTGCAG TTGTGGTTTC GCTCTGTTCC
ACCTCCGATG AAACCATTGA AGAAGCCGAG AAAGATCTGC CGCGCAATCT CTGCCCGCTG
ATTAAAAGCA GCTACGGCTT CGGCAAAACC GATAAATGCC CCTACTTCTA CTTTTCCGAT
CTGGTGGTGG GTGAAACCAC CTGCGACGGC AAAAAGAAAA TGTATGAATA CATGGCAGAG
TTTAAGCCCG TGCATGTGAT GCAATTGCCC AACAGCGTTA AGGACGATGC CTCGCGTGCA
TTATGGAAAG CTGAGATGCT GCGCTTACAA AAAGCGGTAG AGGAACGTTT TGGACACGAG
ATTAGCGAAG ATGCTCTGCG CGATGCCATT GCGCTGAAAA ACCGCGAACG TCGCGCACTG
GCTAATTTTT ATCATCTTGG GCAGTTAAAT CCTCCGGCGC TTAGCGGCAG CGACATTCTG
AAAGTGGTTT ACGGCGCAAC CTTCCGGTTC GATAAAGAGG CGTTGGTTGA CGAACTGGAT
GCAATGACCG CCCGCGTTCG TCAGCAGTGG GAAGAAGGCC AGCGACTGGA CCCGCGTCCA
CGCATTTTAA TCACCGGCTG CCCAATTGGC GGCGCAGCAG AGAAAGTGGT GCGCGCGATT
GAAGAGAATG GCGGCTGGGT TGTCGGTTAT GAAAACTGCA CCGGGGCGAA AGCCACCGAG
CAATGCGTGG CGGAAACGGG TGATGTGTAC GACGCGCTGG CGGATAAATA TCTGGCGATT
GGCTGCTCCT GTGTTTCGCC GAACGATCAG CGCCTGCAAA TGCTCAGCCA GATGGTTGAA
GAATATCAGG TCGATGGCGT AGTTGATGTG ATTTTGCAGG CGTGCCATAC CTACGCGGTG
GAATCGCTGG CGATTAAACG TCATGTGCGT CAGCAGCACA ACATTCCTTA TATCGCTATT
GAAACAGACT ACTCCACCTC AGATGTCGGG CAGCTCAGCA CCCGTGTCGC GGCCTTTATT
GAGATGCTGT AA
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| Protein sequence | MSLVTDLPAI FDQFSEARQK GFLTVMDLKE RGIPLVGTYC TFMPQEIPMA AGAVVVSLCS
TSDETIEEAE KDLPRNLCPL IKSSYGFGKT DKCPYFYFSD LVVGETTCDG KKKMYEYMAE
FKPVHVMQLP NSVKDDASRA LWKAEMLRLQ KAVEERFGHE ISEDALRDAI ALKNRERRAL
ANFYHLGQLN PPALSGSDIL KVVYGATFRF DKEALVDELD AMTARVRQQW EEGQRLDPRP
RILITGCPIG GAAEKVVRAI EENGGWVVGY ENCTGAKATE QCVAETGDVY DALADKYLAI
GCSCVSPNDQ RLQMLSQMVE EYQVDGVVDV ILQACHTYAV ESLAIKRHVR QQHNIPYIAI
ETDYSTSDVG QLSTRVAAFI EML
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