44 homologs were found in PanDaTox collection
for query gene GM21_2867 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011146  Gbem_1413  2-hydroxyglutaryl-CoA dehydratase D-component  92.77 
 
 		 415 aa  807    Geobacter bemidjiensis Bem  Bacteria  normal  0.657921  n/a   
 
 
-
 
NC_012918  GM21_2867  Benzoyl-CoA reductase  100 
 
 		 415 aa  858    Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011830  Dhaf_3453  2-hydroxyglutaryl-CoA dehydratase D-component  32.68 
 
 		 409 aa  237  3e-61  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_1685  2-hydroxyglutaryl-CoA dehydratase D-component  28.75 
 
 		 424 aa  176  6e-43  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000455282  n/a   
 
 
-
 
NC_009943  Dole_0931  2-hydroxyglutaryl-CoA dehydratase D-component  27.18 
 
 		 419 aa  173  5.999999999999999e-42  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_1537  benzoyl-CoA reductase, subunit B  28.43 
 
 		 436 aa  164  4.0000000000000004e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_0725  benzoyl-CoA reductase, subunit B  27.1 
 
 		 436 aa  157  3e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0743165  n/a   
 
 
-
 
NC_007925  RPC_1028  benzoyl-CoA reductase, subunit B  26.7 
 
 		 436 aa  156  6e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal  1 
 
 
-
 
NC_011662  Tmz1t_2950  benzoyl-CoA reductase, subunit B  25.92 
 
 		 432 aa  152  8.999999999999999e-36  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2400  2-hydroxyglutaryl-CoA dehydratase D-component  27.25 
 
 		 425 aa  108  2e-22  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_16080  2-hydroxyglutaryl-CoA dehydratase D-component  24.57 
 
 		 426 aa  105  1e-21  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1771  2-hydroxyglutaryl-CoA dehydratase D-component  22.7 
 
 		 419 aa  89.4  1e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.433973 
 
 
-
 
NC_010320  Teth514_1899  2-hydroxyglutaryl-CoA dehydratase, D-component  23.5 
 
 		 416 aa  88.2  3e-16  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_1746  2-hydroxyglutaryl-CoA dehydratase D-component  24.01 
 
 		 408 aa  87  6e-16  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1707  2-hydroxyglutaryl-CoA dehydratase D-component  25.98 
 
 		 415 aa  84.3  0.000000000000003  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_0199  2-hydroxyglutaryl-CoA dehydratase D-component  20.05 
 
 		 416 aa  80.9  0.00000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000602439  n/a   
 
 
-
 
NC_007644  Moth_1006  2-hydroxyglutaryl-CoA dehydratase, D-component  23.8 
 
 		 421 aa  70.9  0.00000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0695891  hitchhiker  0.000177823 
 
 
-
 
NC_009715  CCV52592_0873  2-hydroxyglutaryl-CoA dehydratase, D-component  26.09 
 
 		 385 aa  68.6  0.0000000002  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_0545  2-hydroxyglutaryl-CoA dehydratase D-component  23.08 
 
 		 379 aa  68.6  0.0000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1100  2-hydroxyglutaryl-CoA dehydratase D-component  27.7 
 
 		 436 aa  64.3  0.000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_3161  2-hydroxyglutaryl-CoA dehydratase, D-component  22.7 
 
 		 382 aa  60.1  0.00000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013517  Sterm_1694  2-hydroxyglutaryl-CoA dehydratase D-component  23.13 
 
 		 382 aa  59.7  0.0000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_1311  2-hydroxyglutaryl-CoA dehydratase D-component  22.87 
 
 		 388 aa  57.8  0.0000004  Methanosphaerula palustris E1-9c  Archaea  normal  0.522959  normal  1 
 
 
-
 
NC_009943  Dole_2775  2-hydroxyglutaryl-CoA dehydratase D-component  22.7 
 
 		 469 aa  57  0.0000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2519  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  26.83 
 
 		 387 aa  54.3  0.000004  Geobacter sulfurreducens PCA  Bacteria  normal  0.321633  n/a   
 
 
-
 
NC_008346  Swol_0412  (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative  22.55 
 
 		 424 aa  52.8  0.00001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  20.85 
 
 		 373 aa  52.8  0.00001  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  22.03 
 
 		 373 aa  51.2  0.00003  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3878  2-hydroxyglutaryl-CoA dehydratase, D-component  22.95 
 
 		 472 aa  51.2  0.00004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  20.85 
 
 		 373 aa  50.4  0.00005  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_011832  Mpal_1135  2-hydroxyglutaryl-CoA dehydratase D-component  24.1 
 
 		 494 aa  50.1  0.00007  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  0.207631 
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  22.13 
 
 		 401 aa  48.5  0.0002  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_009943  Dole_0892  2-hydroxyglutaryl-CoA dehydratase D-component  21.2 
 
 		 481 aa  48.5  0.0002  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_2056  2-hydroxyglutaryl-CoA dehydratase, D-component  22.41 
 
 		 405 aa  48.9  0.0002  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.727818 
 
 
-
 
NC_011832  Mpal_1137  2-hydroxyglutaryl-CoA dehydratase D-component  23.13 
 
 		 494 aa  47.8  0.0003  Methanosphaerula palustris E1-9c  Archaea  normal  0.417243  normal  1 
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  20.66 
 
 		 373 aa  47.4  0.0005  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_009943  Dole_2770  2-hydroxyglutaryl-CoA dehydratase D-component  22.51 
 
 		 466 aa  47.4  0.0005  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  21.74 
 
 		 372 aa  46.2  0.001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_009483  Gura_3877  2-hydroxyglutaryl-CoA dehydratase, D-component  23.9 
 
 		 395 aa  45.8  0.001  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1708  2-hydroxyglutaryl-CoA dehydratase D-component  29.36 
 
 		 322 aa  45.8  0.002  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_1146  2-hydroxyglutaryl-CoA dehydratase D-component  23.21 
 
 		 501 aa  44.3  0.004  Methanosphaerula palustris E1-9c  Archaea  normal  0.114062  normal  1 
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  21.07 
 
 		 373 aa  43.9  0.005  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
-
 
NC_013165  Shel_26180  Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB  21.58 
 
 		 384 aa  43.5  0.008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_0828  2-hydroxyglutaryl-CoA dehydratase D-component  27 
 
 		 393 aa  43.1  0.009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.0000331904 
 
 
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