| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16080 |
|---|
| Symbol | |
|---|
| ID | 7312644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1722912 |
|---|
| End bp | 1724192 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643612055 |
|---|
| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
|---|
| Protein accession | YP_002509352 |
|---|
| Protein GI | 220932444 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGTG GATTATCTGC TTTTTTTTCC TTATTAAGTA AAGAGAGAAA ACTAAAGCTG
TTTAAAAAGG GGTTAAAAAA TAGATTTTTA TATAAACTGG CTGAACTGGG AAGCAGAACT
GGTAGTACTG GTTATATGCA GGAAGCCCTC CTTTATTCAA TAAAAGAAAC CCGGGCGGCA
TATTTAAAGG AAAGGCCGGT TATCTGGTGT AGTACGTTTG TTCCCAGTGA ACTGGTTTAT
GCTCTGGGCG GGGTACCTTT CATGCCAGAG GTAGCAGCAG GTCTTGCGGC CGCTCTGGGT
GTAGCCGATG ATTTTTTGAG ACAGGCTGAA GAAGACTGGA TAAGTTCGGA TCTCTGTAGT
ATTCACCGGT GTGGCTGGGG GCTTACTAAA GCCGGTTTAC TTCCTGAACC AGATCTGATT
ATTGCTGCTT CTCATTTATG TGACGGGGCC AAAAAATATC TACAGCAGAT AAGTTATTAT
AAGGGTATCC CTTTTTATCT TCTGGAAACA CCTTATCATC CTGATGATGC CGACTGGCTT
GCTCATCAAA TCAAGGACCT GGTGAGAGAA CTTGGGGGGG TTAAAGAGGA TTTTGAAACA
GTATTTACAT ATTCCAACCG GGCATACCGG GCCCATCAGC GGGTCAACCA ATTGAGAAAA
AAAATACCGG CCCCCATGTC GGGTGAGGAG GCCATGAATC TTGTCAGTAT GGAATTTATG
TCCTCCGGGA GTCCAGCTGC AGTAAACTAT TACCGGACCC TTGAAAAAGA GCTAAAGAAG
AGAATAAAAG AAAAAAAGGG GGTTGTACCC CGGGAAAAAC ACCGTCTCCT CTGGCTTCAT
CTAAAACCCT ACTATAGACA GGAAATATTT ACCACCCTGG CCCGGAATGA TGCCGTTATT
GCCTTTGAGG AATATAGTCA GTTATACTGG TTACCTTTAG ATTCCACTAA ACCTTATCAA
AGCCTGGCCT GGAAAATGAT AAACCATTTT GGCTGGGGTC CATTAGAGCG GCAGCTGGAA
CGGATCAGAA AAATGGTGAT TGATTATAAT ATAGATGGGG TTATCGGTTT CTCCCACTGG
GGTTGCCGTC AGAGTAGTGG TCGTAATGGT TTCCTTAAAA AAGAGCTTCA GAAAAAAGGA
ATTCCCTTTT TAAATCTTGA TGGTGACCTG GTAGATATCC GCAACTACCG GGAAGGTCAG
ATTATTACCA GACTTCAGGC CTTTATAGAA GTACTGGAAA GCAGAAATGG AGGGATAAAC
TATGCTGATA GCAGGACTTG A
|
|---|
| Protein sequence | MGSGLSAFFS LLSKERKLKL FKKGLKNRFL YKLAELGSRT GSTGYMQEAL LYSIKETRAA
YLKERPVIWC STFVPSELVY ALGGVPFMPE VAAGLAAALG VADDFLRQAE EDWISSDLCS
IHRCGWGLTK AGLLPEPDLI IAASHLCDGA KKYLQQISYY KGIPFYLLET PYHPDDADWL
AHQIKDLVRE LGGVKEDFET VFTYSNRAYR AHQRVNQLRK KIPAPMSGEE AMNLVSMEFM
SSGSPAAVNY YRTLEKELKK RIKEKKGVVP REKHRLLWLH LKPYYRQEIF TTLARNDAVI
AFEEYSQLYW LPLDSTKPYQ SLAWKMINHF GWGPLERQLE RIRKMVIDYN IDGVIGFSHW
GCRQSSGRNG FLKKELQKKG IPFLNLDGDL VDIRNYREGQ IITRLQAFIE VLESRNGGIN
YADSRT
|
|---|
| |