| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2056 |
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| Symbol | |
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| ID | 3974014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2249896 |
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| End bp | 2251113 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637925165 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase, D-component |
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| Protein accession | YP_531930 |
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| Protein GI | 90423560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.727818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCG ACAACATCGC GCAGCAGCGC GCCACTCAAT ACGAGAACAT GCTGCGTCTG
ATCGGGCGCC AGCGGGCGCC ATCGGAAGAG GCCGCGCCGG CGCTCGCCGC GACCCGGATG
CGCTCGGTCG TGAACTGCGA CCGGATCGCC GAGGCCTACA GGGCCGATGC GAAGGTCGCG
TACGTTTCCG AGCAATTCCC GACCGAGATC GTGTTCGCCG CCGGTGTTCT GCCGTGGAAC
ATCGAGTCGA TGTCGAACAT GCTGGCCCAG TCGCTCGATA TCGACCAGGT GTTCCGGCTC
ACCCAGGAAC GCGAGCTGTC CCGCGATATC TGCTCGTTCC TTCGCGGGCC GTTCGGGATG
ATGCTCGCCG AATGCTATCC GCGGCCCGAC TTCGTGCTCA CCAACGACCA GCCCTGCGAG
GGGCTTCTCA AGACCATCTT CATGTCCGGC AAGCGCTACG GGGTGCCGAC CTTCGCGCTG
CACACGCCGA ACCTGCTGGA TCAGGATGTG CTGGACTATC TCGTCCAGCA GATCGAGATC
ATGCTGACCC GGATCGCCGG GGTGTTTCAG TCAGATCCGG ATCCGGAGTT CTTGCGCAGC
AGCATCGTGA ATTCGAATCG CGCCCGCGAG TACTACCGGA AAGCGGCTCT GCTGCTCGAA
CGCCACGCTT TGCCCGGCGT GGCGCGCGAG CTCCTGGAAA TTTTCGGGAT GAACTATTTC
GGCGCCCCGG AGAACATCGA TCTCTGCAAG ACCTTGTATG AGGAGGCGGT GGTGCTGGCC
GAGACCGGGG CGCCGAAGCG CCCGCGGGTG ATGTGGATCG GCCAGACACC TGGGGAATCC
GACGAATTGC TTCGGCATCT CGGTCGGTCC GTCGACGTGC TGTACTGGGC GCCGCTGTGG
GAAGCGAACC TGGTGGCGCT CGACGAGGAG CAACCGCTGC GCAGCATCGC CGAGCGTGCG
ATCCGCTATC ACTGGAACGC GGAACGAATG GAACGCGACC TCGATCACAT CAGCGACGCG
TACCAGGTCG AGGGATATAT CATCGCCAAC ACCTGGGGAT GCCGCAACAT GATGGCCATC
GGTCCGACGT TTCGATCATT GGCGGCGCGC AAGCGAATCA AGAACCTGAC GATCAGCATC
GATCCCGTCG ATCGCAACAA TTACGCCTTC CCCCATATCA AGAACCGCGT CGACGCGTTT
CTGGAAACAT TGCAGTGA
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| Protein sequence | MDLDNIAQQR ATQYENMLRL IGRQRAPSEE AAPALAATRM RSVVNCDRIA EAYRADAKVA
YVSEQFPTEI VFAAGVLPWN IESMSNMLAQ SLDIDQVFRL TQERELSRDI CSFLRGPFGM
MLAECYPRPD FVLTNDQPCE GLLKTIFMSG KRYGVPTFAL HTPNLLDQDV LDYLVQQIEI
MLTRIAGVFQ SDPDPEFLRS SIVNSNRARE YYRKAALLLE RHALPGVARE LLEIFGMNYF
GAPENIDLCK TLYEEAVVLA ETGAPKRPRV MWIGQTPGES DELLRHLGRS VDVLYWAPLW
EANLVALDEE QPLRSIAERA IRYHWNAERM ERDLDHISDA YQVEGYIIAN TWGCRNMMAI
GPTFRSLAAR KRIKNLTISI DPVDRNNYAF PHIKNRVDAF LETLQ
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