Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1821 |
Symbol | |
ID | 5737563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1708866 |
End bp | 1709987 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641284321 |
Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
Protein accession | YP_001549864 |
Protein GI | 159906202 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGAAT TAAAAAGCAT CAAAAAACTC GATGAAATCT ATTCAAAAAG AAAAGATGAG TTATATCGAG AAAAAAACGA AGGAAAAAAC GTATTCGGTA GATTTTGTGT ATTTGTACCT ACTGAAATTA TATGCGCAGC TGATGCAATT CCTGTTGGAC TTTGTGGTGG AAAAGAGTCT ACCATTCCTT CAGCAGAAGA AGATTTACCG AGAAATATCT GCCCATTGAT CAAATCTTCA TATGGTTTCA AAAAAGATAA AAAATGCCCT TACTTTGAGG CTGCTGATGT TATTGTTGGG GAAACCACCT GTGATGGAAA GAAAAAAATG TTTGAACACA TGGCAGAGAT GTCAGAAATG TATATTATGC ATCTTCCACA CTTTAAGAAC GAAAGGTCGT ATGAATTGTG GTTAAAAGAA GTTTACGATT TTAAAGATTA CGTAGAAAAG TTTACTGGAA ATAAGATTAC CGAAGAAAAA TTAAAAGAAG CAATTGATGA AGAAAACGAA GAAAGAACGT TATCGCACAA ACTTTACGAA TTAAGGTCCA ATATTCCGTC GCCAATAACG GGAACTGATG CATTAAAGAT ATTCCAGAGG TCATTTTTAT TAAATATAAA CGATAGGATT GCAATTTTAA AAGAATTAAT ATCAGAACTC GAAGAACGGG TTAAAAACGG CGAAGGATAC ACTGGAAAGA GAATTTTGGT TGCAGGGTGC CCGATGGTTG CAGGAAATAC GAAAATTGTG GATATTATTG AAGAAGTCGG CGGACTCGTA GTCGGGGAAG AAACGTGTAC CGGCACTAGG AAATTTGATA ATTTGGTTAA AGGATATACA ATCGATGACC TTGCAGAACG ATACTTTAAA ATTAACTGTG CATCCGCATA TAAAAATGAC AGTAGAATCG AAAGAATCAA AGAACTTGTA AAAGAACAAA ATGCTGATGG AGTTGTTTAC TATACATTAC AATACTGCCA CACATTTAAC GTGGAAGGAA CTTTAATTGA AAAAGAACTT AAAAAAGCAG GAATTCCAAT TATTAGAATA GAAACAGATT ATTCAGAAAG TGATACCGAA CAAATAAAAA CGAGGCTCGA AGCATTTGTC GAAATGATTT AA
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Protein sequence | MEELKSIKKL DEIYSKRKDE LYREKNEGKN VFGRFCVFVP TEIICAADAI PVGLCGGKES TIPSAEEDLP RNICPLIKSS YGFKKDKKCP YFEAADVIVG ETTCDGKKKM FEHMAEMSEM YIMHLPHFKN ERSYELWLKE VYDFKDYVEK FTGNKITEEK LKEAIDEENE ERTLSHKLYE LRSNIPSPIT GTDALKIFQR SFLLNINDRI AILKELISEL EERVKNGEGY TGKRILVAGC PMVAGNTKIV DIIEEVGGLV VGEETCTGTR KFDNLVKGYT IDDLAERYFK INCASAYKND SRIERIKELV KEQNADGVVY YTLQYCHTFN VEGTLIEKEL KKAGIPIIRI ETDYSESDTE QIKTRLEAFV EMI
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