Gene MmarC6_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1821 
Symbol 
ID5737563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1708866 
End bp1709987 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content34% 
IMG OID641284321 
Product2-hydroxyglutaryl-CoA dehydratase D-component 
Protein accessionYP_001549864 
Protein GI159906202 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGAAT TAAAAAGCAT CAAAAAACTC GATGAAATCT ATTCAAAAAG AAAAGATGAG 
TTATATCGAG AAAAAAACGA AGGAAAAAAC GTATTCGGTA GATTTTGTGT ATTTGTACCT
ACTGAAATTA TATGCGCAGC TGATGCAATT CCTGTTGGAC TTTGTGGTGG AAAAGAGTCT
ACCATTCCTT CAGCAGAAGA AGATTTACCG AGAAATATCT GCCCATTGAT CAAATCTTCA
TATGGTTTCA AAAAAGATAA AAAATGCCCT TACTTTGAGG CTGCTGATGT TATTGTTGGG
GAAACCACCT GTGATGGAAA GAAAAAAATG TTTGAACACA TGGCAGAGAT GTCAGAAATG
TATATTATGC ATCTTCCACA CTTTAAGAAC GAAAGGTCGT ATGAATTGTG GTTAAAAGAA
GTTTACGATT TTAAAGATTA CGTAGAAAAG TTTACTGGAA ATAAGATTAC CGAAGAAAAA
TTAAAAGAAG CAATTGATGA AGAAAACGAA GAAAGAACGT TATCGCACAA ACTTTACGAA
TTAAGGTCCA ATATTCCGTC GCCAATAACG GGAACTGATG CATTAAAGAT ATTCCAGAGG
TCATTTTTAT TAAATATAAA CGATAGGATT GCAATTTTAA AAGAATTAAT ATCAGAACTC
GAAGAACGGG TTAAAAACGG CGAAGGATAC ACTGGAAAGA GAATTTTGGT TGCAGGGTGC
CCGATGGTTG CAGGAAATAC GAAAATTGTG GATATTATTG AAGAAGTCGG CGGACTCGTA
GTCGGGGAAG AAACGTGTAC CGGCACTAGG AAATTTGATA ATTTGGTTAA AGGATATACA
ATCGATGACC TTGCAGAACG ATACTTTAAA ATTAACTGTG CATCCGCATA TAAAAATGAC
AGTAGAATCG AAAGAATCAA AGAACTTGTA AAAGAACAAA ATGCTGATGG AGTTGTTTAC
TATACATTAC AATACTGCCA CACATTTAAC GTGGAAGGAA CTTTAATTGA AAAAGAACTT
AAAAAAGCAG GAATTCCAAT TATTAGAATA GAAACAGATT ATTCAGAAAG TGATACCGAA
CAAATAAAAA CGAGGCTCGA AGCATTTGTC GAAATGATTT AA
 
Protein sequence
MEELKSIKKL DEIYSKRKDE LYREKNEGKN VFGRFCVFVP TEIICAADAI PVGLCGGKES 
TIPSAEEDLP RNICPLIKSS YGFKKDKKCP YFEAADVIVG ETTCDGKKKM FEHMAEMSEM
YIMHLPHFKN ERSYELWLKE VYDFKDYVEK FTGNKITEEK LKEAIDEENE ERTLSHKLYE
LRSNIPSPIT GTDALKIFQR SFLLNINDRI AILKELISEL EERVKNGEGY TGKRILVAGC
PMVAGNTKIV DIIEEVGGLV VGEETCTGTR KFDNLVKGYT IDDLAERYFK INCASAYKND
SRIERIKELV KEQNADGVVY YTLQYCHTFN VEGTLIEKEL KKAGIPIIRI ETDYSESDTE
QIKTRLEAFV EMI