| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1146 |
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| Symbol | |
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| ID | 7270410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1175615 |
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| End bp | 1177120 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643569779 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
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| Protein accession | YP_002466212 |
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| Protein GI | 219851780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.114062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAA GTGTAGCACA GGGTGCCCAT AAGAGCGCTA ATAAATTGTT CCAATATCCA
GAATACCTGA AGGAGAGGTT CCTCAAAACC AGTGACATAG AATTCCGATA TTCAAAAACG
GTCACTCCTG AAGAGATCTG GCACTTCATG ACCGTGGATG CTCCCCGGAG ATATCCATAC
GCGTACGAGA TCAATCCATG GTTCATGGAC CAGATATCCG CAGATATCGG TTTCCTGACC
GGGATTAAAT GCAGATACCT GCGGCTCTCC CAGAAGGATC GGTTCTTAGA GGCCCATAAT
AATGGCGTTC CCATCATCTT CACCCAGGGC GGCCAGACCT TTGAACCGTA TTATGCCGCA
GGCGGCATCC CCCTGCGACC AGGTCTTATC GCCCGGTTCG CAGATGATAT GACCGAAGGG
CAGACACTGC TCCAGACCTC CCAGGATCAT AAGGAGAAAT TGGAGTTCGG GAACAAACTG
TTAACTACAG AATCCTGCCC GATTGTCGGT CCACATATCA GCGCCCAGAG AGGTCTCATT
CCGGTCGACC TGATCGCTCC GTACCTCTGC CTGCGCTGCT CTGACAAACA GTACCTGGTT
GAATCGTACA GAAACACCAA GAACGTTGAG TCTTACAAGA ACCCTGCGTC CCGCGGACCC
TTCTACAAGG ATAAAATTCC GCTCATGCTG ATAGATTATC CCATCGATAA CCAGAATGAT
AAGGAATGGG CGACGGATTA CCTCGAGACG ATGCTCAGGA ACCTGACGGC AAAAGTCAGT
GAACTGTCCG GAAAAGAGGT TACCGACAAG GTCCTTGCTG AAGAGATCCA TTACGAGAAC
AAGGTCAGGA AAATTACCCA GGATCTCGTA CACCTCTGGT GGAAAGCCCC GGCACCTCCG
ACCAACAGTT CGGATTTTGC CGGGACATCA AATACATCGG CCGGCGTATT CAGGATTGGG
AACGAATTCA GCGGTGACCC GAACGGTGCA TACTCTGTCC TGAAGGATGC ATATACGGAA
ATTGCAGAGA GGGTCAGGAC TGGTGTGAAA GGCGTCGGGG TCTCTGACGA TCCAGTCCGG
CTGTACATCT GCGGTCCGGC TGCGACAGAG ACAACAGATC CCGGGTTTAT CGACAGTATC
GGCGGGGTTG TCGTTGGAAA AGACGACCAG TGGAGTGAGA TCTGCACGCT GGTGGACGAA
GGAGGAAACA ATCCCTACAG GAACCTAGCA AAGGCAATCC TCTCGTTCCC GATGGAACTC
CCCACAGAAG AGCGGGCGCA ATGGACCATC GAACAGGTCA AACAGTCCCG GGCAGACGGG
CTGATCTTCA CCCACACCTG GGGCTGCAAC TTCCAGTCCT CTGTGGCACG TATGATCTGC
GATATTGTTC GGGATGAAGC TGGAATCCCA GTTATGGATA TGGGAACAGC AGGCGGTTTC
AATGCACAAG GGGAGGAACA GTCAAAGACT CGGCTCGGAG CCTTTATCGA GATGGTAAAT
GGATGA
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| Protein sequence | MTESVAQGAH KSANKLFQYP EYLKERFLKT SDIEFRYSKT VTPEEIWHFM TVDAPRRYPY
AYEINPWFMD QISADIGFLT GIKCRYLRLS QKDRFLEAHN NGVPIIFTQG GQTFEPYYAA
GGIPLRPGLI ARFADDMTEG QTLLQTSQDH KEKLEFGNKL LTTESCPIVG PHISAQRGLI
PVDLIAPYLC LRCSDKQYLV ESYRNTKNVE SYKNPASRGP FYKDKIPLML IDYPIDNQND
KEWATDYLET MLRNLTAKVS ELSGKEVTDK VLAEEIHYEN KVRKITQDLV HLWWKAPAPP
TNSSDFAGTS NTSAGVFRIG NEFSGDPNGA YSVLKDAYTE IAERVRTGVK GVGVSDDPVR
LYICGPAATE TTDPGFIDSI GGVVVGKDDQ WSEICTLVDE GGNNPYRNLA KAILSFPMEL
PTEERAQWTI EQVKQSRADG LIFTHTWGCN FQSSVARMIC DIVRDEAGIP VMDMGTAGGF
NAQGEEQSKT RLGAFIEMVN G
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