| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1135 |
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| Symbol | |
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| ID | 7270399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1164775 |
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| End bp | 1166259 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643569768 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
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| Protein accession | YP_002466201 |
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| Protein GI | 219851769 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.207631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA GTGCTATCAA ACTGTTCCAG TACCCCGAAT CACTGAAAGA AAGATTCCTG
CAAACCAGTG ATATCGAGTT CCGGTACTCT AAAACGGTCA CCCCGGAAGA GATCTGGCAT
TTCATGACCG TGGATGCTCC CCGGAGGTAC CCGTACGCCT ACGAGGTCAA TCCATACTTT
CGGGATCAAA TATCTGCTGA TATCGGATTT TTGACCGGAA TAAAGAGCAG ATATCTTCGG
CTCTCTCTCA AGGACCGGCT TCTGAACGCT CACGAGAATG GGGTACCAAT CATCTTCACA
CAGGGTGGCC AGACCTTTGA ACCTTACTAC ACCGCCGGCG GAATCCCCCT GCGTCCAGGC
CTGATCTCAC GTTTCGCAAA TGATCTCACT GAAGGACAGA CAGTCAATGA GCTGGGGAAT
AGCCGGAAGG AGAAACTGGA GTTTGGAAAT AAACTGATCT CCACAGAATC GTGCCCGATT
GTGGGTGCTC ACGTCACTGC ACAGCGGGGT ATCGTTCCCG TCGATCTCGT CGCACCGTAC
CTCTGTCTGC GCTGTTCAGA CAAACAGTAC CTCGTCGAAT CCTACCGGAA TCGTAAAAAT
GTCGAAGCAT ATCTGAACCC TGCTTCCCGT GGACCGTACT TTAAGGAGAA CATTCCCCTG
ATGCTGATCG ATTATCCCAT CGATCAACAG AATGAAAAAG ACTGGGCAAT TGACTATCTT
GAGACAATGC TCCGGAACCT GACGGCAAAA GTCAGTGAAT TGTCAGGAAA AGAGGTGAAC
GATCAGGTGC TTGCCGAGGA GATCCGGTAT GAGAACAAGG TCAGAAAACT CACTCAGAAT
ATTGTTCACC TCTGGTGGAA CGCCCCCGTA CCTCCAACCA ACAGTTCGGA TTTCGTCGGT
ACATCAAATA CATCGGCCGG ATTGTTCAGA ATCGGAAATG AGTTCAGCGG CGATCCGAAT
GGAGCGTATT CGGTCCTGAA AGATGCATGC GCCGAACTAC AGGAGCGGGT TCGGAACGGG
GTGAAAGGTG TCGGCGTGGC AGATGACCCG GTACGGATTT ATATCTGCGG GCCGGCCGCG
ACGGAAAGCG CCGACCCTGG ACATATCGAC CGTGTTGACG GCGTTGTCGT TGGAAAAGAT
GACCAGTGGA GTGAGATCAG CACATTGGTG GATGAAGGGG GAAACAATCC TTATCGGAAT
CTCGCCAGGG CTATCCTCTC ATTCCCAATG GAACTTCCCA CCGAGGAACG GGCAGCATGG
ACCATTGAAC AGGTGAAAAA ATCTCGGGCT GATGGGTTGA TCTTTACCCA TACCTGGGGG
TGCAACTTCC AGTCTTCTGT TGCGAGGATG ATCTGTGATA TTGTGCGGGA TGAAGCAGGT
ATCCCGGTCA TGGATACGGG AACTGCTGGA GGAGGCCCCA GTTTATTGGG AGAGGAACAG
TCAAAGACCC GACTCGGAGC CTTTATTGAG ATGATATCAG GATAA
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| Protein sequence | MTQSAIKLFQ YPESLKERFL QTSDIEFRYS KTVTPEEIWH FMTVDAPRRY PYAYEVNPYF
RDQISADIGF LTGIKSRYLR LSLKDRLLNA HENGVPIIFT QGGQTFEPYY TAGGIPLRPG
LISRFANDLT EGQTVNELGN SRKEKLEFGN KLISTESCPI VGAHVTAQRG IVPVDLVAPY
LCLRCSDKQY LVESYRNRKN VEAYLNPASR GPYFKENIPL MLIDYPIDQQ NEKDWAIDYL
ETMLRNLTAK VSELSGKEVN DQVLAEEIRY ENKVRKLTQN IVHLWWNAPV PPTNSSDFVG
TSNTSAGLFR IGNEFSGDPN GAYSVLKDAC AELQERVRNG VKGVGVADDP VRIYICGPAA
TESADPGHID RVDGVVVGKD DQWSEISTLV DEGGNNPYRN LARAILSFPM ELPTEERAAW
TIEQVKKSRA DGLIFTHTWG CNFQSSVARM ICDIVRDEAG IPVMDTGTAG GGPSLLGEEQ
SKTRLGAFIE MISG
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