| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1137 |
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| Symbol | |
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| ID | 7270401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1167636 |
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| End bp | 1169120 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643569770 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
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| Protein accession | YP_002466203 |
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| Protein GI | 219851771 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.417243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA GTGCTATAAA ATCATTTCAG TATCCTGAAT CACTGAAAGA GAAATTCTTA
AAGACCAGTG ATATCAAGTT TCGGTATTCA AAAACGGTCA CCCCGGAAGA GATCTGGCAT
TTCATGACTG TGGATGCTCC CCGGAGGTAC CCGTACGCCT ACGAGGTCAA CCCCTATTTT
ATGGACCAGA TATCTGCGGA TGTCAATTTT CTGACTGGGA TTAAGTGTAG GTATCTGCGA
CTTTCCCAGA AGGATCGGTT CTTAGGGGCC CACAATAATG GAGTACCGAT CATCTTCACA
CAGGGAGGGC AGACATTCGA ACCGTACTAT GCCGCAGGCG GTATTCCCAT GCGACCCGGC
CTGATCTCCC GGTTTGCTGA CGATCTTGTT GAAGGGCAGA CCCTGAATCA GTTGGGAAAC
AATAAGAAGG AAAAACTTGA GTTCGGACAT AAATTGATCC ATACGGAATC CTGCGGTATT
GTCGGATCGC ACGTCACAGT CCAGAGAGGG CTTGTCCCAG TCGATCTTAT CGCACCGTAC
CTCTGCCTGC GCTGTTCCGA TAAACAGTAC CTGGTGGAGT CATACCGGAA CATAAAAAAT
GTCGAATCAT ACGATGACCC CGCGTCACGT GGACCCTACT TCAAAAAGGA TATTCCCCTG
ATGCTGATCG ATTACCCGAT AGATAACCAG AACGAGAAGG AATGGGCAAC CGATTATCTT
GAGACAATGC TCAGGAATCT GACCGCGAAG ATCACCGAAC TTGGCGGAAA GGAGGTTACG
GATAAGGACC TTGCCGAAGA GATCCGGTTT GAGAACAAGA TCAGAAAACT CACCCAGGAT
ATCGTCCATC TCTGGTGGAG TGCGCCGGTT CCCCCGACCA ACAGTTCGGA TTTCGCCGGG
ACGTCAAGTA CTTCTGCCGG CTTGTTCAGG ATCGGAAATG AGTTCAGCGG GGATCCGAAT
GGAGCCTACT CGGTCCTGAA AGATGCCTAT ACCGAACTGC AGGAACGGGT CCGGACAGGT
GTGAAAGGTA CAGGAGTATC TGATGATCCA GTTCGGATCT ATATCCTCGG CCCTGCGGCC
ACCGAGACAC TGGACCCGGG ATATATTGAC AAACAGGGAG GCGTGGTCGT AGGAAAAGAT
GACCAGTGGA GCGAGATCTG CACGCTGGTC GATGAAGGCG GAAACAATCC GTACCAGAAC
CTTGCAAAAG CAATTCTCTC GTTCCCGATC GAGTTACCGA CAGAACAACG GGCTGAATGG
GCAATCCAGC AGGTGAAACA ATCCCGGGCT GACGGCGTGA TCTTCACACA CACCTGGGGA
TGCAACTTCC AGTCGTCCGT TGCCCGTATG ATCTGCGACA TCATCAGGGA TGAAGTAGGT
GTTCCAGTCA TGGATACAGG AAATAACAGT GGAAACTCCT CAGGACTCGG GGAGGAGCAG
TCTAAGACCC GGGTCGCGGC ATTTATCGAG ATGATATCAG GATGA
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| Protein sequence | MPQSAIKSFQ YPESLKEKFL KTSDIKFRYS KTVTPEEIWH FMTVDAPRRY PYAYEVNPYF
MDQISADVNF LTGIKCRYLR LSQKDRFLGA HNNGVPIIFT QGGQTFEPYY AAGGIPMRPG
LISRFADDLV EGQTLNQLGN NKKEKLEFGH KLIHTESCGI VGSHVTVQRG LVPVDLIAPY
LCLRCSDKQY LVESYRNIKN VESYDDPASR GPYFKKDIPL MLIDYPIDNQ NEKEWATDYL
ETMLRNLTAK ITELGGKEVT DKDLAEEIRF ENKIRKLTQD IVHLWWSAPV PPTNSSDFAG
TSSTSAGLFR IGNEFSGDPN GAYSVLKDAY TELQERVRTG VKGTGVSDDP VRIYILGPAA
TETLDPGYID KQGGVVVGKD DQWSEICTLV DEGGNNPYQN LAKAILSFPI ELPTEQRAEW
AIQQVKQSRA DGVIFTHTWG CNFQSSVARM ICDIIRDEVG VPVMDTGNNS GNSSGLGEEQ
SKTRVAAFIE MISG
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