| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1413 |
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| Symbol | |
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| ID | 6781400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1628347 |
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| End bp | 1629594 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642767407 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
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| Protein accession | YP_002138228 |
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| Protein GI | 197117801 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.657921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAG AAACCAAGCT GGCGAGGAAG AAGATAGAGG CCACTAGCCT AATGAACAGG
ATCATGGCCG ACTATTTTCT GGACCTGAAC CAGGCGTCCG CCAGCAACAG CCGCAAGGTC
GCCTGGTGCA CGAGCGTAGG CCCCGCCGAA CTCTTGAGGG CCATGGGCTT TGCGGTGCAC
TTCCCGGAAA ACCACGCCGC CATGCTGGGG GCGACGCGTC TTGCCACCGA CCTGATCCCG
GAGGCGAACG CCATAGGGTA TTCGCCCGAC ATCTGCTCCT ACCTCACCTC CGATCTCGGC
GCCTACCTCA AAGGCTTCAC CCCGCTCGCC AAGGCCTACC CCGGCATAGC GGCGGTCCCC
AAGCCCGACG TGCTGGTCTA CAACACCAAC CAGTGCCGCG ACGTACAGGA CTGGTTCGCC
TGGTACGCCC GGGAGCTGGG GGTGCCGTTG ATCGGTATCA CCTCGCCTAA GAACGTGAAC
GAGGTGACCG AGGCCCACGT GGAGGACGTG ACGAGGCAGT TGGAGGCGCT GGTCCCGGTA
CTGGAGGGGA TCGCCGGCGC GCCGCTCGAC CTCGCGCGGC TTAAGGAAGT GGTCGCTCTC
TCGCGCGACT GCACCGAACT CTGGAAAGAG GTCCTGGAGA CTGCCACGGC GGTCCCAGCG
CCCCTTACCT TCTTCGACGG GACCATCCAC ATGGGGCCGG CCGTGGTGCT CCGGGGGACG
CCGCAGGCGG TCGAGTACTA CCGGGTGCTC CTGGCCGAGT TGGAGCAGAG AAAGGCTACG
CGGGAAGCTG CGGTTGCCGG CGAGGAATAC CGCATCTACT GGGACGGCAT GCCGGTGTGG
GGGCGCCTCA GGCCGCACTC CGAGCTCTTC GCGGGGCTTA AGACCAACGT GGTCGCCTCC
ACCTACTGCT CCAGCTGGAT CTTCCCGGCC TTCGACGCCG AAGAGCCGCT GCGCAGCATG
GCCAAGGCGT ACCTGGAACT CTTCATCGTC CGCTCCGACG CCTACAAGGA GCGCTACCTG
GCCGATATGA CGAAGAAATT CCGCATCGAC GGGATCGTCT ACCACGACGC CAAAACCTGC
CCCTACAACT CCAACAGCCG CTACGGCATG CCGCAGCGCC TGGAGGCGGA GACGGGGCTG
CCGTACCTGG TCATCTCCGG CGATCTCAAC GACATGCGCT GCGTCTCCGA CGAACAGACC
AAGACCAACG TGGAAGCATT CATCGAACAA CTCGAGGAGG GGAAATGA
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| Protein sequence | MKEETKLARK KIEATSLMNR IMADYFLDLN QASASNSRKV AWCTSVGPAE LLRAMGFAVH
FPENHAAMLG ATRLATDLIP EANAIGYSPD ICSYLTSDLG AYLKGFTPLA KAYPGIAAVP
KPDVLVYNTN QCRDVQDWFA WYARELGVPL IGITSPKNVN EVTEAHVEDV TRQLEALVPV
LEGIAGAPLD LARLKEVVAL SRDCTELWKE VLETATAVPA PLTFFDGTIH MGPAVVLRGT
PQAVEYYRVL LAELEQRKAT REAAVAGEEY RIYWDGMPVW GRLRPHSELF AGLKTNVVAS
TYCSSWIFPA FDAEEPLRSM AKAYLELFIV RSDAYKERYL ADMTKKFRID GIVYHDAKTC
PYNSNSRYGM PQRLEAETGL PYLVISGDLN DMRCVSDEQT KTNVEAFIEQ LEEGK
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