| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0892 |
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| Symbol | |
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| ID | 5693727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1044328 |
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| End bp | 1045773 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641263489 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
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| Protein accession | YP_001528779 |
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| Protein GI | 158520909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTCA GACCGCCCAC CGGATTGTTT GACCAGCTGG CCCTGCAGTT CGCGATTATC
GAAAAACTTC CCCGGGGGTT TATCGACAAG GCCGGTTTCC TGATGAACGC CCTGAAGCTG
GTACCCGAGG ACGCCCGCAA GTCCATGAAC GCCCTCTGGG AGCCCCACGT AAAGGAAGCC
AGCCTGGATT ACACCAAAAT GGCGGCCACC TGGATCATGA ACGCCAAGCG GGCCGCCAAA
GAAGGCAAAA AGGTCATCCT GGTGCCCTTT AATTTCCCCT GTGAACTCAT TCACGCCTTT
GAAAGCGCGG TCCCCCTGAC CAGTGAGGTG CTGACCACCC TGGGGGTCTC CATGCTGAAA
GGGCAGGGAG AGGAGTTCTG GGACGTGGCC ATGGGCCTGG GGTTGCCCGA CCATATCTGT
TCGGCCAATG CCATTGAACT GGGATCGGTT CTTTCCGGTG ATGATTTCAA ACCCGACGCC
ATCATCTCCA GTTCCCCGGG CGGGTGCGAC GTAAACGCCA AAATCCACGA GTTCGTCTCC
CATTATCTGA ATATTCCCCA GTTTTTTCTG CAAAAGCCCA CCGATGATTC GGGCCGCGGC
CGGCAGTGGT ACGGCACCTA CATGCACAAC CTGGTCACCG ATCTGGAAAA TTTCCTCGGG
GAAACCCTGG ACGAAGAGCG GCTGCGGCAG GCCATGACCC GGGCCAACCG CTGCACCGAG
CTGTATTACG ATTTGTGGGA TCTGCAGCAG GCCGTCCCGA GCCCGGTACC GAATATTTTT
TCCCTGTTTT TGTACGGCAC CCGTTTTTCC ATGTGGGGAA CCGATGCCGG GGTGGGCCTG
ATGGAAACCC TGGTGCGCAT CAGCCAGGAC CGCCTGGTCC GAAAGGCATA CCCCGCTGAA
CGGGAAAGGG CCCGCAGCCT CTGGGCCTAT ACCAGTTATT ATCATGATTT TTTCGGATTT
TTCAGCTGGA TGGAAAAGCA GGGGATTTCC CATCTGGGAG ACGGCCTGGA CCTGTTTTTC
CCCAGTGTGG TGGATACCAC CAGCAGGGAA ACCATGATCG AAGGGTTGAC CGATGCAGCC
TGGAACATGC CCATGACCCG GCAGGTGGGC GCGGAATCCA TGTCCGGTTC CTGGACCGAT
GATGTCGTTT ACGCGGCCAA GTCATTGCAG GCCGATTGCG TCATCTACTG CGGTCACCAC
TCCTGCAAGC AGACCTGGGG GGTGATCTCG ATTCTCAGGG ATGAACTGGC CAGGCGGCTG
GGTATTCCCA TCCTGATCCT GCAGGGCGAT TCCTGGATGA AGAAAATGAC CCCCATGAGC
GATCTGCAGA ACCAGGTGGA GGAGTTTGTC AATAATGTCG TGGCCCGCAA GGAGAGCGGC
AAGCGGAAAA TCCGGCAGCG CAAGCGGGCC AAAGCCGACC TGCGGGCTTC GGAAAAAGAC
GGATGA
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| Protein sequence | MRFRPPTGLF DQLALQFAII EKLPRGFIDK AGFLMNALKL VPEDARKSMN ALWEPHVKEA
SLDYTKMAAT WIMNAKRAAK EGKKVILVPF NFPCELIHAF ESAVPLTSEV LTTLGVSMLK
GQGEEFWDVA MGLGLPDHIC SANAIELGSV LSGDDFKPDA IISSSPGGCD VNAKIHEFVS
HYLNIPQFFL QKPTDDSGRG RQWYGTYMHN LVTDLENFLG ETLDEERLRQ AMTRANRCTE
LYYDLWDLQQ AVPSPVPNIF SLFLYGTRFS MWGTDAGVGL METLVRISQD RLVRKAYPAE
RERARSLWAY TSYYHDFFGF FSWMEKQGIS HLGDGLDLFF PSVVDTTSRE TMIEGLTDAA
WNMPMTRQVG AESMSGSWTD DVVYAAKSLQ ADCVIYCGHH SCKQTWGVIS ILRDELARRL
GIPILILQGD SWMKKMTPMS DLQNQVEEFV NNVVARKESG KRKIRQRKRA KADLRASEKD
G
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