Gene Shel_26180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_26180 
Symbol 
ID8396506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2888665 
End bp2889819 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content59% 
IMG OID644987360 
ProductBenzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
Protein accessionYP_003144970 
Protein GI257065298 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCA GGAAAGAACT GCCGGAAATC TTCGAGGAAT TCGCCGAAGG CCGCAAGAAC 
GCCTTCCTTT CCGCAAAGAA GCAGAAGGAC AAGAACCTTC CGCTGGTGGG AACGTATTGC
ACCTACGTTC CGGTCGAGCT GCCCATGGCC ATGAACGCCG CCGTGGTGGG CCTGTGCTCC
ATGTCGGACG AGACCATCCC GCTGGCCGAG CGCGATTTGC CTGCAAGCCT GTGCCCGCTC
ATCAAGTCGA GCTACGGCTT CGCCAAGTCC GACAAGTGCC CGTTCTTCTA CTTCAGCGAT
CTGGTGGTTG CCGAAAGCAC CTGCGACGGC AAGAAGAAGA TGTACGAGCT CATGAGCGAA
TTCAAGCCCA TGCACATCAT GCAGCTGCCC AACACCCAGG ACGAGGACGG CTTCGCCCTG
TGGAAGAAGG AGGTCATCCG CTTCAAGGAG AAGCTCGAGG ACTTCTTCGG CGTCGAAATC
ACCGAGGACC AGATTCGCGA AGCCATCAAG CTGCGTAACG AAGAGCGCCG CGCCGCCCTG
GAGATTTTCG ACCTGATGAA GATGGATCCC ACGCCTGTCA TGGGCTACGA CCTGTTCAAG
GTTGTCTACG GCGCATCGTT CACCTTCGAC CGCGAACTGG CCGTCAAGCA GATGCGCGAG
GTGAAGGATC GCATTCTGGA GGAGGCCGAG GAGAACAGCG CCAAGATCGG CCACAAGCCG
CGCATCATCA TCTCCGGTTG CCCGATGGGC GGCGCCACCG AGAAGGTCGC CCGCATCATC
GAGGAGACCG GCGGCGTGGT GGTCGCCTTC GAGAACTGCA CCGGCATCAA GAACTACTAC
AACCTGGTCG ACGAGGACAA CCCCGACGTC TACGAGGCTC TGGCCGAGCG CTACTTCAAG
ATCGGCTGCT CGGTGATGTC TCCTGACACG TACCGCTTCC AGCTGCTGGG CGAACTTATC
GACGAGTTCA AGGCCGACGC CGTTGTGGAC ATGACCCTGC AGGGCTGCCA CACCTACAAC
ATCGAGACCT ACGAGGTGAG CCGCTTCGTG ACCGAAGAGA AGGGCATCGC CTACTACCAT
GTGGAAACCG ACTATTCCAA CGCCGACGAA GGCCAGCTGA ACACCCGTCT GCAGGCCCTC
ATCGAGATGC TTTAG
 
Protein sequence
MEIRKELPEI FEEFAEGRKN AFLSAKKQKD KNLPLVGTYC TYVPVELPMA MNAAVVGLCS 
MSDETIPLAE RDLPASLCPL IKSSYGFAKS DKCPFFYFSD LVVAESTCDG KKKMYELMSE
FKPMHIMQLP NTQDEDGFAL WKKEVIRFKE KLEDFFGVEI TEDQIREAIK LRNEERRAAL
EIFDLMKMDP TPVMGYDLFK VVYGASFTFD RELAVKQMRE VKDRILEEAE ENSAKIGHKP
RIIISGCPMG GATEKVARII EETGGVVVAF ENCTGIKNYY NLVDEDNPDV YEALAERYFK
IGCSVMSPDT YRFQLLGELI DEFKADAVVD MTLQGCHTYN IETYEVSRFV TEEKGIAYYH
VETDYSNADE GQLNTRLQAL IEML