| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0828 |
|---|
| Symbol | |
|---|
| ID | 6316480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 865557 |
|---|
| End bp | 866738 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642643201 |
|---|
| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
|---|
| Protein accession | YP_001917001 |
|---|
| Protein GI | 188585456 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000331904 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGCCATGA AAACACTTAA GGGAGGGCTT TATTTGAGAC CACAAACCAT GGAGTTTTTT
GATAGTTTGA TTCCAGAGAA TATGGCTAAA ATCAAAGAAT TAAAGGAAGC TGGAAGAAAT
GTCGTAGGAT ATTATTGTGT TTTTACACCG GTTGAACTGA TAGAAGCTTC TGGAGCAATT
CCAGTTGGAC TTTGTGCTAC AAAACAGGAC CCTATACCAG CAGCTGAGGA AGATCTACCG
AGAAATCTGT GTCCTTTGAT TAAGTCAAGT TATGGTTTTG CTAAAACTGA TACTTGTCCG
TTCTTTTATT TTTCCGATGT GGTAATGGCA GAGACCACAT GTGATGGTAA GAAAAAAATG
TATGAAATGC TAAATGAATA TAAACCTATG ATGGTATTAG ATATTCCAAA TTCATCGACA
TATGAAAAAA AGCAAGAACA CTGGATCCAA GAATTAAAAC GTGCCAAATC ATATCTAGAA
GAACAGTTTG ATGTGGAGGT TACTCAAGAG AGCTTGGAAA AAGCCATTAA AGGCCATAAT
CAGGAGAGAA CGAAGTTAAT GGAGCTTGTT TCTCTAAACC AGCACAACCC CGCACCATTA
TCAGGGCAAG ACCTTTTAAA AGTTATTTGG GCACGGCAGT TTCAACTAAA TCGTGATGAA
TATCTTGAAA AAATACAAAA TATTATTAAT GAAACCAAAG AAATAATAAA TAATCAGTCC
TTTGACGATA GTTTGGCAAA AAAACCGCGA ATACTAGTTA CCGGCTCCCC TACTGGTGTT
GGGCAAGAAA AAACCCTGAA TATTATAGAA CAACAAGGTG GACAAGTTGT TCTTAAAGAA
GCCTGTTCAG GTGTGAAGGG TCTAGTTAAA AATATTAGTG AAACAGAAGA GCCATTAGCT
GCTATAGCTG AAAAATACAT GGAACTTCCT TGCTCATGTA TTTCACCAAA TGATGGAAGA
TTTGAGCTCA TTAGTGAGTT AGTAAAAGAC TATCAAATTG ATGGAGTAAT AGATATAACT
TTACAAGCAT GTCACACTTA TAATATTGAA TCTTATTTAC TAAAAGAACA TCTCCAAAAA
AATCATGACA TACCTATGCT TCAGATAGAA ACTGACTATA CAGATACAGA TGTTGAACAG
ATTAAACTTC GCGTAGACTC TTTTTTAGAA ATGTTGTCTT AA
|
|---|
| Protein sequence | MAMKTLKGGL YLRPQTMEFF DSLIPENMAK IKELKEAGRN VVGYYCVFTP VELIEASGAI
PVGLCATKQD PIPAAEEDLP RNLCPLIKSS YGFAKTDTCP FFYFSDVVMA ETTCDGKKKM
YEMLNEYKPM MVLDIPNSST YEKKQEHWIQ ELKRAKSYLE EQFDVEVTQE SLEKAIKGHN
QERTKLMELV SLNQHNPAPL SGQDLLKVIW ARQFQLNRDE YLEKIQNIIN ETKEIINNQS
FDDSLAKKPR ILVTGSPTGV GQEKTLNIIE QQGGQVVLKE ACSGVKGLVK NISETEEPLA
AIAEKYMELP CSCISPNDGR FELISELVKD YQIDGVIDIT LQACHTYNIE SYLLKEHLQK
NHDIPMLQIE TDYTDTDVEQ IKLRVDSFLE MLS
|
|---|
| |