| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3453 |
|---|
| Symbol | |
|---|
| ID | 7260471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3685610 |
|---|
| End bp | 3686839 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643563376 |
|---|
| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
|---|
| Protein accession | YP_002459907 |
|---|
| Protein GI | 219669472 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG AGACGCAGCA ACGGAATTAT CGTCCCCTGC GCAGTACGGA TACCCTGAAG
AAAACCATGA AGCGTTACTA TATCTTAACC GGGTATCACC GCTATTGGGG TAAGCCGCTG
GGCCGCAAGA TTGCCTGGGT AACCAGCGGC GCCCCTGTGG AAATTTTGCG GGCTTTTAAG
ATTCATCCGG CTTACCCGGA GCAATACGCT GCTATTTACA GCACCAATAA GGCCACGGCC
CGATTATGCC AGGTGGCGGA AGCGGCAGGC TATTCCCAGG ATCTATGCTC CTATGCCCGC
TCCAATATCG GTGGAGTTTT ACGGCCGGAT CTGGCCCCTT TAGGAGGAAT GCCCAAGCCT
GATCTGCTGG TGGCCTGCAA TAATATCTGC GGTACAGTAT TAAAATGGTA TGAAGTGCTG
GCCCGGCACT TTAAAGTTCC TTTGCTGGTG CTGGATACTC CTTACCTGAC GGGAGAGATG
ACGGAGCAGG CCAGGAATTA TGTCCTGGAG CAGCTTAAGG CCATGGTTGT GGAGCTGGAG
AAAATTACCG GCAGGACATT AGATGAAAAA GAGCTGGAGA AGCAGATGGA ATTCAGCCGG
GAAACAACCG GTCTCTGGAA AGAGGCCCGT CAAGCCTGTC AATCCCGCCC CTCCCCCCTG
AATGCGCCCG ATCTCTTTAT CCATATGGCC CCCATTGTGG TGATGAGAGG GACCAAAGGG
GGGCGGGATT ATTACCGGTT GTTTCGTGAC GAGGTCAAGG GGCGGGAGGC CCTGGCCCAG
GGTGCGGTGG AAAATGAGCG GATTCGTTTG GTCTGGGATA ATATTGCGAT TTGGCCTAAA
GTATTCAGTT TCAATAAGAT GTTCACGGAA CGGGGAGCAT GCTTTGTCAC CGATACCTAT
AGCGGCGGCT GGGCCATGGA GCAGGCACCG GGTACCCCTT TGGAAAGTCT GGCCGCCACC
TATACGGAAG TTTTCCTGAA CCGTTCCCCG GAATTCCGCA CCAAACAACT GGTGCAGCTC
ATTCGGGACT ATCAGGCCGA TGGATTCGTA ATGCACTCCA ATCGCTCCTG TAAGCCCTAT
TCTCTGGTCC AGGAGGTTAT CCGCAGAAGG GTTATGATGG AGACAGGTGT TCCGGGATTG
ATGATCGAAG CCGATATGGC TGATCCCCGG GCTTATGCAG AAGAACCCAT CCGCAATCGT
GTTCAGGCCT TTTTGGAGAC CTTCGATTGA
|
|---|
| Protein sequence | MTQETQQRNY RPLRSTDTLK KTMKRYYILT GYHRYWGKPL GRKIAWVTSG APVEILRAFK
IHPAYPEQYA AIYSTNKATA RLCQVAEAAG YSQDLCSYAR SNIGGVLRPD LAPLGGMPKP
DLLVACNNIC GTVLKWYEVL ARHFKVPLLV LDTPYLTGEM TEQARNYVLE QLKAMVVELE
KITGRTLDEK ELEKQMEFSR ETTGLWKEAR QACQSRPSPL NAPDLFIHMA PIVVMRGTKG
GRDYYRLFRD EVKGREALAQ GAVENERIRL VWDNIAIWPK VFSFNKMFTE RGACFVTDTY
SGGWAMEQAP GTPLESLAAT YTEVFLNRSP EFRTKQLVQL IRDYQADGFV MHSNRSCKPY
SLVQEVIRRR VMMETGVPGL MIEADMADPR AYAEEPIRNR VQAFLETFD
|
|---|
| |